GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2026-01-09 14:25:43, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sciurus vulgaris genome assembly, chromosome: 10.
LR738620.1:100583434-100583453
CTGCAATTCTCCCTCTCCCTGACACCAACG100583434AGAGGAGAGAGAAGTGGGGGGGAGTTCATGGAAGGTGGAGGCAGAGTGGG
Onychomys torridus genome assembly, chromosome: 21.
LR877208.1:24520023-24520042
AACCCTGTGGAAAGTTTTATTATTAAAGGG24520023AGAGGAGAGAGAAGTGGGGGGGAGGGCGGAGAAAGGCAGAGGTGTGTGCA
Acomys russatus genome assembly, chromosome: 15.
LR877226.1:55895210-55895229
GGAGAAAGCAGTAGAGCAGCAGGAGGAGGA55895210AGAGGAGAGAGAAGTGGGGGGAAGAGTTGTGATAAGGCAAGATGGCGCTG
Mus musculus molossinus genome assembly, chromosome: 10.
OW971667.1:88900302-88900321
GGCAGAAAGAGTTAACCCTGTAAAAGAGAG88900302AGAGGAGAGAGAAGTGGGGGCATAACAAAATATGAGCATTTTAAAGTCGC
Onychomys arenicola genome assembly, chromosome: 21.
OX460367.1:39898982-39899001
AACCCTGTGGAAAGTTTTATTATTAAAGGG39898982AGAGGAGAGAGAAGTGGGGGGAGGGCGGAGAAAGGCAGAGGTGTGTGCAG
Onychomys leucogaster genome assembly, chromosome: 21.
OX460391.1:14971582-14971601
AACCCTGTGGAAAGTTTTATTATTAAAGGG14971582AGAGGAGAGAGAAGTGGGGGGGAGGGCGGAGAAAGGCAGAGGTGTGTGCA
Onychomys arenicola genome assembly, chromosome: 21.
OX460462.1:35452815-35452834
AACCCTGTGGAAAGTTTTATTATTAAAGGG35452815AGAGGAGAGAGAAGTGGGGGGAGGGCGGAGAAAGGCAGAGGTGTGTGCAG
Onychomys torridus genome assembly, chromosome: 21.
OX460902.1:24520023-24520042
AACCCTGTGGAAAGTTTTATTATTAAAGGG24520023AGAGGAGAGAGAAGTGGGGGGGAGGGCGGAGAAAGGCAGAGGTGTGTGCA
Muscardinus avellanarius genome assembly, chromosome: 19.
OY726576.1:869289-869308
GAGAGGGAGAAAGAGAGAGATAGAAAAGAA869289AGAGGAGAGAGAAGTGGGGGGAGGAGAGATCAAAGGATCTAAAAGCCAGT
Spermophilus citellus genome assembly, chromosome: 6.
OZ077383.1:19433803-19433822
CCCCCAAAGGCATTTCATTAGTTTAAAGAG19433803AGAGGAGAGAGAAGTGGGGGGGAGAGGTTGAAGCCTGTTCTCTTGGCAAA
Acomys minous genome assembly, chromosome: 19.
OZ186493.1:55361351-55361370
AGAGAAAGCAGCAGAGCAACAGGAGGAGGA55361351AGAGGAGAGAGAAGTGGGGGGAAGAGTTATGATAAGGCAAGATGGTGCTG
Canis lupus familiaris breed Labrador retriever chromosome 10a.
CP050591.1:58571620-58571639
GTAGCAGAGAGGATGTGAAGACAGAAGAAG58571620AGAGGAGAGAGAAGTGGGGGGGGCGCGGAGAAGGAGATTCGCTGTTGGCT
Canis lupus familiaris breed Labrador retriever chromosome 10b.
CP050611.1:6058990-6059009
GGGGGCAGGGGAGTGCAGGGTGAAGAGGAG6058990AGAGGAGAGAGAAGTGGGGGGAAAGAGGCGGCAGGATGGCACCTACCGGG
Sus scrofa scrofa breed NS chromosome 14.
CP071565.1:122737957-122737976
CTGCAAAACTAAAACTCTTGACTTTTCTTG122737957AGAGGAGAGAGAAGTGGGGGAGGTTTGTAGCCCCCACGCACTGAGTCTTC
Capra hircus breed Inner Mongolia Cashmere goat isolate AEBS_806099 chromosome 14.
CP155495.1:71376915-71376934
ATTTCTCCCAGCAGAGAGGAAACTGGAAGG71376915AGAGGAGAGAGAAGTGGGGGAGGGCAGGGAGGGAGCATAGGTGAGACTGA
Capra hircus breed Inner Mongolia cashmere goat chromosome 14.
CP162222.1:71425638-71425657
ATTTCTCCCAGCAGAGAGGAAACTGGAAGG71425638AGAGGAGAGAGAAGTGGGGGAGGGCAGGGAGGGAGCATAGGTGAGACTGA
Capra hircus breed Inner Mongolia cashmere goat chromosome 14.
CP168341.1:71411016-71411035
ATTTCTCCCAGCAGAGAGGAAACTGGAAGG71411016AGAGGAGAGAGAAGTGGGGGAGGGCAGGGAGGGAGCATAGGTGAGACTGA
Capra hircus breed Inner Mongolia cashmere goat chromosome 14.
CP168371.1:71311965-71311984
ATTTCTCCCAGCAGAGAGGAAACTGGAAGG71311965AGAGGAGAGAGAAGTGGGGGAGGGCAGGGAGGGAGCATAGGTGAGACTGA
Canis lupus genome assembly, chromosome: 1.
HG994383.1:73518810-73518829
TTAAAGATTAACTTACTTATTATTTGAGAG73518810AGAGGAGAGAGAAGTGGGGGAGGGGCAGAGGGAGAGGGAGAGACATCCTC
Canis lupus genome assembly, chromosome: 10.
HG994393.1:7875638-7875657
GGGGGCAGGGGAGTGCAGGGTGAAGAGGAG7875638AGAGGAGAGAGAAGTGGGGGGAAAGAGGCGGCAGGATGGCACCTACCGGG
Sarcophilus harrisii genome assembly, chromosome: 1.
LR735554.1:489906538-489906557
GGGGACGAAAGTGGGAGAGAGAAGAGAAAA489906538AGAGGAGAGAGAAGTGGGGGGGAGGAAGGGAGAGAGACAGAAGAAAAAGA
Meles meles genome assembly, chromosome: 6.
OV277446.1:44796177-44796196
GTGGATCCCAGGAAACAAATTGAAGGTTTC44796177AGAGGAGAGAGAAGTGGGGGAAGGGAGTAACAGGGTGATGGGTATTAAGG
Hyperoodon ampullatus genome assembly, chromosome: 1.
OX457056.1:209201044-209201063
CTGCAGAACTAAAACATTTGGCTTTTCTTG209201044AGAGGAGAGAGAAGTGGGGGAGGTTTGTAGCCCCCCCCCCATACTGCATC
Sus scrofa genome assembly, chromosome: 2.
OY997209.1:157422305-157422324
AAAACATATTTTTAAAAGAGCACAGACCTG157422305AGAGGAGAGAGAAGTGGGGGCTGGAGACCCAGCTCTGCCACCAACTAGCT
Sus scrofa genome assembly, chromosome: 14.
OY997221.1:144598598-144598617
CTGCAAAACTAAAACTCTTGACTTTTCTTG144598598AGAGGAGAGAGAAGTGGGGGAGGTTTGTAGCCCCCACGCACTGAGTCTTC
Myotis mystacinus genome assembly, chromosome: 4.
OZ065556.2:5521697-5521716
TGTCCCGATCCATGTCCCCAAACCAGGGAA5521697AGAGGAGAGAGAAGTGGGGGGCGTGTCCTTGAGGAAAAAGATAGACTGGT
Neogale vison genome assembly, chromosome: 10.
OZ067092.1:109104737-109104756
CTATAAAAACAGAATATACTGATGGTTGCC109104737AGAGGAGAGAGAAGTGGGGGGCTTGGGCCAAATAGGGGAAGGGGAGTATA
Neogale vison genome assembly, chromosome: 10.
OZ067347.1:108150790-108150809
CTATAAAAACAGAATATACTGATGGTTGCC108150790AGAGGAGAGAGAAGTGGGGGGCTTGGGCCAAATAGGGGAAGGGGAGTATA
Miniopterus schreibersii genome assembly, chromosome: 12.
OZ071104.1:54312024-54312043
AGAGGAGAGCAGAGGAAAGGAGAGGAGGGG54312024AGAGGAGAGAGAAGTGGGGGAAACAAGCACAAGGCGTCCTCAGCTCCTCG
Myotis mystacinus genome assembly, chromosome: 4.
OZ077854.1:5476942-5476961
TGTCCCGATCCATGTCCCCAAACCAGGGAA5476942AGAGGAGAGAGAAGTGGGGGGCGTGTCCTTGAGGAAAAAGATAGACTGGT
Myotis emarginatus genome assembly, chromosome: 4.
OZ220651.1:5418573-5418592
TGTCCCAATCCATGTCCCCAAACCAGAGAA5418573AGAGGAGAGAGAAGTGGGGGGGGGGGGGGCCTGTCCCCAAGGAAAAAGAC
601650527R1 NIH_MGC_76 Homo sapiens cDNA clone IMAGE:3934086 3', mRNA sequence.
BF126737.1:123-142
TGGTCGGGTGAGGTGGAGTTGAGGAAACTG123AGAGGAGAGAGAAGTGGGGGAGAGAAGAGGTGTGTGTGGAACAAAAAGAA
P00440_DH5_DECO4_PLATE1_A12_M13F-20_A12_096 Smu-1 Sphaerulina musiva cDNA, mRNA sequence.
EG356942.1:570-589
GCCCGTCAGTTGCCGGATGAGATGTCGAGG570AGAGGAGAGAGAAGTGGGGGGTGGTCAGCGATGTAGCCGCGTAGTTCTGT
Mus musculus molossinus DNA, clone:MSMg01-111J20.T7, genomic survey sequence.
AG324240.1:109-128
GGCAGAAAGAGTTAACCCTGTAAAAGACAT109AGAGGAGAGAGAAGTGGGGGCATAACAAAATATGAGCATTTTAAAGTCGC
Rattus norvegicus clone CH230-162L13, WORKING DRAFT SEQUENCE, 2 unordered pieces.
AC099370.7:150153-150172
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG150153AGAGGAGAGAGAAGTGGGGGAGGCCAGCTAGGAACATAAGAGAGAGAGGG
Pig DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH242-32I22.
CU984594.2:74734-74753
AAAACATATTTTTAAAAGAGCACAGACCTG74734AGAGGAGAGAGAAGTGGGGGCTGGAGACCCAGCTCTGCCACCAACTAGCT
Malpighia emarginata NRA309 DNA, chromosome 5, complete sequence.
AP035806.1:8317069-8317088
AAGATTGATTGAGTCGATGTATTGATAGAA8317069AGAGGAGAGAGAAGTGGGGGGGAGGGGATGATGAATGATAATTGTGAGGA
Triticum aestivum genome assembly, chromosome: 7B.
LR865779.1:122078143-122078162
GGGCATCAAGAGAAATGGAGAGTGGAGGAA122078143AGAGGAGAGAGAAGTGGGGGAAGGGAGCAGTTCGCTAAAGCCCACGACGC
Avena sativa genome assembly, chromosome: 7A.
OU342384.1:384766618-384766637
NNNNNNNNNNNNNNNNNGGACTGGGGTGAG384766618AGAGGAGAGAGAAGTGGGGGGGGCTGGCATGTGGGAGGTGAGGTGGCAGC
Avena sativa genome assembly, chromosome: 7.
OV702285.1:388024417-388024436
GAGAGAGAGGGTAGGAGGGACTGGGGTGAG388024417AGAGGAGAGAGAAGTGGGGGGGGCTGGCATGTGGGAGGTGAGGTGGCAGC
Russula aff. farinipes genome assembly, chromosome: 2.
OZ116687.1:2095202-2095221
AGGATGTGCAGACAAAGAATCGGACATTGC2095202AGAGGAGAGAGAAGTGGGGGGGAGATGGGAGAGAGAGAGAGGCAGTTCAC
Dasysyrphus albostriatus genome assembly, chromosome: 1.
OX276335.1:90022356-90022375
CATTTAATAAATAATTTACATTAACTTCCC90022356AGAGGAGAGAGAAGTGGGGGCACCAGCACAGGAAACTAACAAAAGATGTT
Dasysyrphus albostriatus genome assembly, chromosome: 1.
OX276335.1:237775500-237775519
CATTTAATAAATAATTTACATTAACTTCCC237775500AGAGGAGAGAGAAGTGGGGGCACCAGCACAGGAAACTAACAAAAGATGTT
Dasysyrphus albostriatus genome assembly, chromosome: 2.
OX276336.1:141883154-141883173
CATTTAATAAATAATTTACATTAACTTCCC141883154AGAGGAGAGAGAAGTGGGGGCACCAGCACAGGAAACTAACAAAAGATGTT
Dasysyrphus albostriatus genome assembly, chromosome: 3.
OX276337.1:10394274-10394293
CATTTAATAAATAATTTACATTAACTTCCC10394274AGAGGAGAGAGAAGTGGGGGCACCAGCACAGGAAACTAACAAAAGATGTT
Dasysyrphus albostriatus genome assembly, chromosome: 3.
OX276337.1:52048403-52048422
CATTTAATAAATAATTTACATTAACTTCCC52048403AGAGGAGAGAGAAGTGGGGGCACCAGCACAGGAAACTAACAAAAGATGTT
Dasysyrphus albostriatus genome assembly, chromosome: 4.
OX276338.1:21677817-21677836
CATTTAATAAATAATTTACATTAACTTCCC21677817AGAGGAGAGAGAAGTGGGGGCACCAGCACAAGAAACTAACAAAAGATGTT
Gastracanthus pulcherrimus genome assembly, chromosome: 4.
OX424575.1:15059644-15059663
GGAGGAGCTTCGGTATTCGCTTTTTGCGAG15059644AGAGGAGAGAGAAGTGGGGGTGTATTTGCGAGGAGGAGAGCGTTTTAATT
Boloria euphrosyne genome assembly, chromosome: 30.
OX637900.1:5675376-5675395
GCTGCGGCCTGGGCGGGACATGTGGAGGTG5675376AGAGGAGAGAGAAGTGGGGGTAGACCAGGGAATGGGGGTTGACAGCTGTT
Eledone cirrhosa genome assembly, chromosome: 26.
OZ024766.1:6644636-6644655
GTGGAGGGGGGGTCTGAGAGAGATGAGAGG6644636AGAGGAGAGAGAAGTGGGGGGTCTGAGAGAGGAGAGATGAGAAGAGAGAG
Eledone cirrhosa genome assembly, chromosome: 26.
OZ024766.1:6644794-6644813
GAGAGAGAAGTGGGGAGTGTCGGAGAGAGG6644794AGAGGAGAGAGAAGTGGGGGTGTCTGAGAGGAGAGTGAAGTGGGGGGAGG
Chrysolina graminis genome assembly, chromosome: 3.
OZ078248.1:127172503-127172522
TTAGATGGTTTAGGTTTCGTATCCACACTA127172503AGAGGAGAGAGAAGTGGGGGGCAAGTAGGTAGTGACAGTTGTGAAAGGGT
Chrysolina graminis genome assembly, chromosome: 7.
OZ078252.1:45082256-45082275
TTAGATGGTTTCGGTTTTGTATCCACACTA45082256AGAGGAGAGAGAAGTGGGGGGCATTTGGGTAGTAATAATTGTGAAAGGGT
Turbinaria reniformis genome assembly, chromosome: 13.
OZ123466.1:35491818-35491837
GGGGAGAGAAGGGGAGGAGGAGGAGAGGGG35491818AGAGGAGAGAGAAGTGGGGGGAGGGGGGAGGAAAGAGGATGGGGAGGAGA
Phyllidia flava genome assembly, chromosome: 2.
OZ184098.1:138256793-138256812
GATACAATCAATACAGCCAGTAGAGTAAAT138256793AGAGGAGAGAGAAGTGGGGGAGGGATGGAGTGAGAGAGATGGAGAGAGAG
Phyllidia flava genome assembly, chromosome: 4.
OZ184100.1:97931588-97931607
GATACAATCAATACAGCCAATAGAGTAAAT97931588AGAGGAGAGAGAAGTGGGGGAGGGATGGAGTGAGAGAGATGGAGAGAGAG
Felimare picta genome assembly, chromosome: 1.
OZ210997.1:150876954-150876973
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG150876954AGAGGAGAGAGAAGTGGGGGGGGGGGGGGGGGGGGGAGGGGGTCTGTAAG
Felimare picta genome assembly, chromosome: 12.
OZ211008.1:43252891-43252910
AGAGAGAGAGAGAGAAAGAAAGAGAGAGAG43252891AGAGGAGAGAGAAGTGGGGGAGAGGGAGAGAGAGAGAGAGGGGAGGGAGG
Peltodoris atromaculata genome assembly, chromosome: 3.
OZ218140.1:141349713-141349732
TCAGTGTATGTGTGTGTGACAGAGAAAGAG141349713AGAGGAGAGAGAAGTGGGGGGAGGGGATATACGTGGGCGCTTGTTAGAGA
Peltodoris atromaculata genome assembly, chromosome: 7.
OZ218144.1:63436184-63436203
CTGATAAGACAGTTAACACTTAGATTAACG63436184AGAGGAGAGAGAAGTGGGGGGGGGGGGTGAAACAGAAGGGGAGAGAGAGT
Salmo trutta genome assembly, chromosome: 14.
LR584411.1:28840476-28840495
AGGTGAACTCCATCACTATCCCCCAAGAGG28840476AGAGGAGAGAGAAGTGGGGGAGTGGAGGTGACATCAGTCAGGCAGCAAGT
Microcaecilia unicolor genome assembly, chromosome: 5.
LR594636.1:188220439-188220458
CGGGTAGGGGGGGAAGGGGGGAGGGGAGGG188220439AGAGGAGAGAGAAGTGGGGGGGACGGGGGAGAAGGACAGGGCAGACTTTT
Microcaecilia unicolor genome assembly, chromosome: 7.
LR594638.1:206104159-206104178
GACATGAAGTTTACAGAACTGGGGAGGGAG206104159AGAGGAGAGAGAAGTGGGGGCAGCAGAAGGAGAACAGAGAGACCATGCTG
Scyliorhinus canicula genome assembly, chromosome: 1.
LR744030.1:185078509-185078528
GGAGAGAGGCGGGGGGTGGGGGGGGGGGGG185078509AGAGGAGAGAGAAGTGGGGGAGGGGGAGAGAGAGGGGGGGGAGAGAGGGG
Scyliorhinus canicula genome assembly, chromosome: 3.
LR744032.1:251665664-251665683
TGCTTACTTGAAGGGGGGGGGGGGGGGAGG251665664AGAGGAGAGAGAAGTGGGGGGTGATGCCCATGTCAGCAGGGGATCACATT
Notothenia rossii genome assembly, chromosome: 10.
OX449120.1:5445186-5445205
AAATGGAGAAGCATGTAGACAGGCAGCAAC5445186AGAGGAGAGAGAAGTGGGGGTGAGTTCATATTGGGGAGGGGGGTGGATGG
Gymnoscopelus microlampas genome assembly, chromosome: 7.
OY732709.1:24829856-24829875
AGAGGAGGAGGCCCAGAGAAAACAGCAGAT24829856AGAGGAGAGAGAAGTGGGGGAGGACAATAGAACCAGAGAGAGGAGACCAG
Raja brachyura genome assembly, chromosome: 3.
OY740783.1:65133685-65133704
GAGAGAACGGAGCGAGAGAAGGGAGAGAGA65133685AGAGGAGAGAGAAGTGGGGGAGAGAGAGAGGGGAGAGAGAGAAAAGGGGA
Microstomus kitt genome assembly, chromosome: 4.
OZ184382.1:9067812-9067831
AGAGAGGAGAGCCGAGAGGGGAAATTGGAA9067812AGAGGAGAGAGAAGTGGGGGGAAAGAAATTGACGAGAATTGGTGGTTGAG
Hemorrhois hippocrepis genome assembly, chromosome: 3.
OZ203518.1:209120189-209120208
GGAAGAGAGACAGAGAGAGAGAGAAGGGGG209120189AGAGGAGAGAGAAGTGGGGGAGAGAGAGGAGAGAGAAAGAGAGAGGAGCA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGAGGAGAGAGAAGTGGGGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGAGGAGAGAGAAGTGGGGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.216 | 0.207 | search_plus_done; http://172.18.8.135:50800/match?q=AGAGGAGAGAGAAGTGGGGG&k=0&no_gap=0&offset=0&limit=50
0.301 | 0.085 | search_minus_done; http://172.18.8.135:50800/match?q=CCCCCACTTCTCTCTCCTCT&k=0&no_gap=0&offset=0&limit=0
0.301 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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