GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 07:31:56, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

EG_Ba038K12.R EG_Ba Eucalyptus grandis genomic 3', genomic survey sequence.
JM671313.1:668-688
CCTACGGCGACTCCACCGAGCGGCTCGTCC668ACCAGTTCTCCCGCGCCCTCTCCATCCGCCTCCACCGCTCCGCTGTGGCCG
Pseudomonas sp. GXZC chromosome, complete genome.
CP114115.1:5021167-5021187
CGACATAGTCAGCGACACGCTCATTCGCCA5021167ACCAGTTCTCCCGCGCCCTCTGTTCGGTCAAACGGGGTATGTCGTCCTCAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGAGGGCGCGGGAGAACTGGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGAGGGCGCGGGAGAACTGGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.094 | 0.085 | search_plus_done; http://172.18.8.135:50400/match?q=AGAGGGCGCGGGAGAACTGGT&k=0&no_gap=0&offset=0&limit=50
0.161 | 0.067 | search_minus_done; http://172.18.8.135:50400/match?q=ACCAGTTCTCCCGCGCCCTCT&k=0&no_gap=0&offset=0&limit=50
0.163 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).