GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 04:36:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Brassica rapa subsp. pekinensis clone KBrH125B21, complete sequence.
FP340387.1:30088-30107
ACTAGGGGGACAAGCGGTGCGACCGCCCCG30088AGCCCAAGCTCGTATTCCTTCGTATAATAATAATTTTTATAAATTTATAT
Brassica rapa genome, scaffold: A06.
LR031569.1:8381054-8381073
ACTAGGGGGACAAGCGGTGCGACCGCCCCG8381054AGCCCAAGCTCGTATTCCTTCGTATAATAATAATTTTTATAAATTTATAT
Brassica rapa genome assembly, chromosome: A06.
LS974622.2:9217956-9217975
ACTAGGGGGACAAGCGGTGCGACCGCCCCG9217956AGCCCAAGCTCGTATTCCTTCGTATAATAATAATTTTTATAAATTTATAT
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH006P24, complete sequence.
AC189558.2:67430-67449
ATATAAATTTATAAAAATTATTATTATACG67430AAGGAATACGAGCTTGGGCTCGGGGCGGTCGCACCGCTTGTCCCCCTAGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGCCCAAGCTCGTATTCCTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGCCCAAGCTCGTATTCCTT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.115 | 0.106 | search_plus_done; http://172.18.8.135:50400/match?q=AGCCCAAGCTCGTATTCCTT&k=0&no_gap=0&offset=0&limit=50
0.133 | 0.019 | search_minus_done; http://172.18.8.135:50400/match?q=AAGGAATACGAGCTTGGGCT&k=0&no_gap=0&offset=0&limit=47
0.134 | 0.001 | cgi_end;

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