GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-20 22:10:19, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sequence 3 from patent US 5256558.
AR364161.1:1579-1608
ATATCTTCCCGCACAACACACCAAACACAA1579AGGAAGCATACTACTACAGAATGATCTTTGAGCGGTTCTTCCCTCAGAACTCGGCAAGAC
Sequence 244 from patent US 8952218.
HK420336.1:1680-1709
ATATCTACCCCCACAACACCCCAAACACCA1680AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
Sequence 244 from Patent EP2373792.
JB333420.1:1680-1709
ATATCTACCCCCACAACACCCCAAACACCA1680AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
Sequence 244 from patent US 10975382.
MX539473.1:1680-1709
ATATCTACCCCCACAACACCCCAAACACCA1680AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
Medicago truncatula EST, clone mt--abc955108g09.
AJ497397.1:223-252
ATATCTACCCCCACAACACCCCAAACACCA223AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
Medicago truncatula EST, clone MtNF02P16N1.
AJ845371.1:388-417
ATATCTACCCCCACAACACCCCAAACACCA388AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
Medicago truncatula EST, clone MtNF13O17N1.
AJ845929.1:387-416
ATATCTACCCCCACAACACCCCAAACACCA387AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
Medicago truncatula EST MtBA02F07R2 : T7 end of clone MtBA02F07 of cDNA library MtBA from root tips of cultivar Jemalong of Medicago truncatula (barrel medic).
AL365832.1:49-78
ATATCTACCCCCACAACACCCCAAACACCA49AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
Medicago truncatula EST MtBA28G05F1 : T3 end of clone MtBA28G05 of cDNA library MtBA from root tips of cultivar Jemalong of Medicago truncatula (barrel medic).
AL369079.1:297-326
ATATCTACCCCCACAACACCCCAAACACCA297AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
Medicago truncatula EST MtBC12E04F1 : T3 end of clone MtBC12E04 of cDNA library MtBC from arbuscular mycorrhiza of cultivar Jemalong of Medicago truncatula (barrel medic).
AL383192.1:380-409
ATATCTACCCCCACAACACCCCANACACCA380AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
Medicago truncatula EST MtBC15D10F1 : T3 end of clone MtBC15D10 of cDNA library MtBC from arbuscular mycorrhiza of cultivar Jemalong of Medicago truncatula (barrel medic).
AL383603.1:396-425
ATATCTACCCCCACAACACCCCAAACACCA396AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
Medicago truncatula EST MtBC31C09F1 : T3 end of clone MtBC31C09 of cDNA library MtBC from arbuscular mycorrhiza of cultivar Jemalong of Medicago truncatula (barrel medic).
AL385884.1:154-183
ATATCTACCCCCACAACACCCCAAACACCA154AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
N100449e rootphos(-) Medicago truncatula cDNA clone MHRP-6A12, mRNA sequence.
AW126342.2:167-196
ATATCTACCCCCACAACACCCCAAACACCA167AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
M111094e DSIR Medicago truncatula cDNA clone IR177, mRNA sequence.
AW208061.2:239-268
ATATCTACCCCCACAACACCCCAAACACCA239AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
EST306205 DSIR Medicago truncatula cDNA clone pDSIR-8H15, mRNA sequence.
AW267983.1:611-640
ATATCTACCCCCACAACACCCCAAACACCA611AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCA
N200083e rootphos(-) Medicago truncatula cDNA clone MHRP-13H6, mRNA sequence.
AW328891.2:167-196
ATATCTACCCCCACAACACCCCAAACACCA167AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
N200540e rootphos(-) Medicago truncatula cDNA clone MHRP-18F12, mRNA sequence.
AW329315.2:447-476
ATATCTACCCCCACAACACCCCAAACACCA447AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGGCAAGTTATTCAA
N200629e rootphos(-) Medicago truncatula cDNA clone MHRP-19F5, mRNA sequence.
AW329396.2:303-332
ATATCTACCCCCACAACACCCCAAACACCA303AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
N201017e rootphos(-) Medicago truncatula cDNA clone MHRP-23F10, mRNA sequence.
AW329749.2:368-397
ATATCTACCCCCACAACACCCCAAACACCA368AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCC
EST314472 DSIR Medicago truncatula cDNA clone pDSIR-19E3, mRNA sequence.
AW559424.1:357-386
ATATCTACCCCCACAACACCCCAAACACCA357AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
EST391676 GVN Medicago truncatula cDNA clone pGVN-55I3, mRNA sequence.
AW980523.1:79-108
ATATCTACCCCCACAACACCCCAAACACCA79AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
EST403687 MHRP- Medicago truncatula cDNA clone pMHRP-28H16, mRNA sequence.
BE239638.1:221-250
ATATCTACCCCCACAACACCCCAAACACCA221AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
EST422653 MGHG Medicago truncatula cDNA clone pMGHG-14P13, mRNA sequence.
BE943074.1:207-236
ATATCTACCCCCACAACACCCCAAACACCA207AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
NF081E01DT1F1005 Drought Medicago truncatula cDNA clone NF081E01DT 5', mRNA sequence.
BF635494.1:130-159
ATATCTACCCCCACAACACCCCAAACACCA130AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
NF013A03DT1F1021 Drought Medicago truncatula cDNA clone NF013A03DT 5', mRNA sequence.
BG450127.1:49-78
ATATCTACCCCCACAACACCCCAAACACCA49AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
NF098G11DT1F1086 Drought Medicago truncatula cDNA clone NF098G11DT 5', mRNA sequence.
BG451136.1:459-488
ATATCTACCCCCACAACACCCCAAACACCA459AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
NF093F06LF1F1048 Developing leaf Medicago truncatula cDNA clone NF093F06LF 5', mRNA sequence.
BG453261.1:481-510
ATATCTACCCCCACAACACCCCAAACACCA481AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCANAACTCAGCAAGGC
EST489991 MHRP- Medicago truncatula cDNA clone pMHRP-41H21, mRNA sequence.
BG588182.1:271-300
ATATCTACCCCCACAACACCCCAAACACCA271AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
EST490345 MHRP- Medicago truncatula cDNA clone pMHRP-53D8, mRNA sequence.
BG588536.1:728-757
ATATCTACCCCCACAACACCCCAAACACCA728AGGAAGCATACTACTACAGAATGATCTTTGAGAGGGTCTTCCCCCAGAACTCAACAGGGC
EST490374 MHRP- Medicago truncatula cDNA clone pMHRP-53J2, mRNA sequence.
BG588565.1:389-418
ATATCTACCCCCACAACACCCCAAACACCA389AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
EST490873 MHRP- Medicago truncatula cDNA clone pMHRP-59H15, mRNA sequence.
BG589064.1:72-101
ATATCTACCCCCACAACACCCCAAACACCA72AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
NF015B04IR1F1032 Irradiated Medicago truncatula cDNA clone NF015B04IR 5', mRNA sequence.
BI269413.1:313-342
ATATCTACCCCCACAACACCCCAAACACCA313AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
NF003G08IR1F1067 Irradiated Medicago truncatula cDNA clone NF003G08IR 5', mRNA sequence.
BI269496.1:69-98
ATATCTACCCCCACAACACCCCAAACACCA69AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
NF006E01IR1F1006 Irradiated Medicago truncatula cDNA clone NF006E01IR 5', mRNA sequence.
BI269667.1:297-326
ATATCTACCCCCACAACACCCCAAACACCA297AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTT
NF014F06IR1F1058 Irradiated Medicago truncatula cDNA clone NF014F06IR 5', mRNA sequence.
BI269747.1:58-87
ATATCTACCCCCACAACACCCCAAACACCA58AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
EST593134 BNIR Medicago truncatula/Meloidogyne incognita mixed EST library cDNA clone pBNIR-24D9, mRNA sequence.
BM815040.1:330-359
ATATCTACCCCCACAACACCCCAAACACCA330AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
EST593192 BNIR Medicago truncatula/Meloidogyne incognita mixed EST library cDNA clone pBNIR-24N9, mRNA sequence.
BM815098.1:322-351
ATATCTACCCCCACCACACCCCAAACACCA322AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
NF039E12IR1F1098 Irradiated Medicago truncatula cDNA clone NF039E12IR 5', mRNA sequence.
BQ153526.1:205-234
ATATCTACCCCCACAACACCCCAAACACCA205AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
NF043C05IR1F1037 Irradiated Medicago truncatula cDNA clone NF043C05IR 5', mRNA sequence.
BQ153683.1:100-129
ATATCTACCCCCACAACACCCCAAACACCA100AGGAAGCATACTACTACAGAATGATCTTTGAGAGGNTCTTCCCCCAGAACTCAGCAAGGC
NF046E08IR1F1066 Irradiated Medicago truncatula cDNA clone NF046E08IR 5', mRNA sequence.
BQ153793.1:489-518
ATATCTACCCCCACAACACCCCAAACACCA489AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCANAACTCANCAAGGC
NF078A03IR1F1021 Irradiated Medicago truncatula cDNA clone NF078A03IR 5', mRNA sequence.
BQ154617.1:425-454
ATATCTACCCCCACAACACCCCAAACACCA425AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
NF079G10IR1F1084 Irradiated Medicago truncatula cDNA clone NF079G10IR 5', mRNA sequence.
BQ155376.1:634-663
ATATCTACCCCCACAACACCCCAAACACCA634AGGAAGCATACTACTACAGAATGATCTTTGAGANGTTCTT
NF081F04IR1F1043 Irradiated Medicago truncatula cDNA clone NF081F04IR 5', mRNA sequence.
BQ155550.1:489-518
ATATCTACCCCCACAACACCCCAAACACCA489AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
NF090H04IR1F1044 Irradiated Medicago truncatula cDNA clone NF090H04IR 5', mRNA sequence.
BQ156250.1:214-243
ATATCTACCCCCACAACACCCCAAACACCA214AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
NF092E01IR1F1007 Irradiated Medicago truncatula cDNA clone NF092E01IR 5', mRNA sequence.
BQ156398.1:359-388
ATATCTACCCCCACAACACCCCAAACACCA359AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
NF096A11IR1F1085 Irradiated Medicago truncatula cDNA clone NF096A11IR 5', mRNA sequence.
BQ156678.1:425-454
ATATCTACCCCCACAACACCCCAAACACCA425AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
NF096G07IR1F1056 Irradiated Medicago truncatula cDNA clone NF096G07IR 5', mRNA sequence.
BQ156742.1:489-518
ATATCTACCCCCACAACACCCCAAACACCA489AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
NF097D04IR1F1042 Irradiated Medicago truncatula cDNA clone NF097D04IR 5', mRNA sequence.
BQ156802.1:180-209
ATATCTACCCCCACAACACCCCAAACACCA180AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
EST646155 HOGA Medicago truncatula cDNA clone HOGA-27J11, mRNA sequence.
CB893363.1:493-522
ATATCTACCCCCACAACACCCCAAACACCA493AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
EST646692 HOGA Medicago truncatula cDNA clone HOGA-29K2, mRNA sequence.
CB893900.1:413-442
ATATCTACCCCCACAACACCCCAAACACCA413AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
EST647046 HOGA Medicago truncatula cDNA clone HOGA-30H11, mRNA sequence.
CB894254.1:457-486
ATATCTACCCCCACAACACCCCAAACACCA457AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
EST670674 MTUS Medicago truncatula cDNA clone MTUS-26C3, mRNA sequence.
CF069953.1:122-151
ATATCTACCCCCACAACACCCCAAACACCA122AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
s13dNF49G11VI088_439518 Virus-Infected Leaves Medicago truncatula cDNA, mRNA sequence.
CX519149.1:109-138
ATATCTACCCCCACAACACCCCAAACACCA109AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
s13dNF44A12VI097_442538 Virus-Infected Leaves Medicago truncatula cDNA, mRNA sequence.
CX519243.1:119-148
ATATCTACCCCCACAACACCCCAAACACCA119AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGAACTCAGCAAGGC
TSA: Medicago sativa cultivar Chilean F0D_7614 mRNA sequence.
JL874042.1:1635-1664
ATATCTACCCCCACAACACCCCAAACACCA1635AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCTCAGAACTCAGCAAGGC
TSA: Medicago sativa subsp. falcata cultivar Wisfal FZ0_8831 mRNA sequence.
JL890010.1:1616-1645
ATATCTACCCCCACAACACCCCAAACACCA1616AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCTCAGAACTCAGCAAGGC
Lupinus albus cv. Kiev genomic intron sequences, ASN2 Lupinus albus cv. Kiev genomic intron sequences Lupinus albus genomic 5', genomic survey sequence.
EI392817.1:382-411
ACATCTTCCCCCATAACACTCCTAATACAA382AGGAAGCATACTACTACAGAATGATCTTTGAAA
Lupinus albus cv. P27174 genomic intron sequences, ASN2 Lupinus albus cv. P27174 genomic intron sequences Lupinus albus genomic 5', genomic survey sequence.
EI392877.1:389-418
ACATCTTCCCCCATAACACTCCTAATACAA389AGGAAGCATACTACTACAGAATGATCTTTGA
Medicago truncatula chromosome 5 clone mth2-29p15, COMPLETE SEQUENCE.
CT573508.2:7064-7093
ATATCTACCCCCACAACACCCCAAACACCA7064AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGGCAAGTTATTCAA
Medicago truncatula chromosome 5 clone mth2-64o22, COMPLETE SEQUENCE.
CT963106.2:144884-144913
ATATCTACCCCCACAACACCCCAAACACCA144884AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCCCAGGCAAGTTATTCAA
Trifolium fragiferum genome assembly, chromosome: 3.
OX940791.1:16664898-16664927
ATATCTACCCCCATAACACTCCAAACACCA16664898AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCTCAGGCAAGATAATTAA
Medicago lupulina genome assembly, chromosome: 7.
OY283145.1:50432985-50433014
AATTGGTTCTTCACAACACCCCAAACACCA50432985AGGAAGCATACTACTACAGAATGATCTTTGAGAGGTTCTTCCCTCAGGCAAGTTAATCAA
Lathyrus aphaca genome assembly, chromosome: 5.
OZ014523.1:88546659-88546688
ATATCTACCCGCACAACACACCAAACACAA88546659AGGAAGCATACTACTACAGAATGATCTTTGAGCGGTTCTTCCCTCAGGCAAGATAACCAA
Pea AS2 root mRNA for asparagine synthase (EC 6.3.5.4).
X52180.1:1579-1608
ATATCTTCCCGCACAACACACCAAACACAA1579AGGAAGCATACTACTACAGAATGATCTTTGAGCGGTTCTTCCCTCAGAACTCGGCAAGAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).