GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 21:31:38, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Raja brachyura genome assembly, chromosome: 7.
OY740787.1:54242409-54242428
ATAGTGTAGAGAGGATCACAGGAAGAGGAA54242409AGGGATGTGTGGTTGAAGATGGTTGGGGAAATGATTATGGAAGCGAGAGG
TSA: Cannabis sativa PK18469.1_1.CasaPuKu mRNA sequence.
JP449841.1:1826-1845
AATCAAGTAGAATTTGTGTTGCAAAAGATA1826AGGGATGTGTGGTTGAAGATGGCATTGGTCATGAATTAGATGATAATGAG
Triticum monococcum genome assembly, chromosome: 2A.
OY737851.1:149497864-149497883
GAGGAAGTATAATCTGAGGTGGCTGGGCGA149497864AGGGATGTGTGGTTGAAGATGTAGATGGAGAGGGCATGGAGGAAGTATAA
Triticum monococcum genome assembly, chromosome: 2A.
OY737859.1:155375376-155375395
GAGGAAGTATAATCTGAGGTGGCTGGGCGA155375376AGGGATGTGTGGTTGAAGATGTAGATGGAGAGGGCATGGAGGAAGTATAA
Bromus sterilis genome assembly, chromosome: 4.
OX465598.1:25114700-25114719
TGTGTACGAACTCCTCCGTGTGCCCCCTAC25114700ATCTTCAACCACACATCCCTCCAGCCTTAGTTGTTGGTCCGAGCACCGAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGGGATGTGTGGTTGAAGAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGGGATGTGTGGTTGAAGAT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.118 | 0.110 | search_plus_done; http://172.18.8.135:50400/match?q=AGGGATGTGTGGTTGAAGAT&k=0&no_gap=0&offset=0&limit=50
0.136 | 0.018 | search_minus_done; http://172.18.8.135:50400/match?q=ATCTTCAACCACACATCCCT&k=0&no_gap=0&offset=0&limit=46
0.137 | 0.001 | cgi_end;

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