GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 07:08:45, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

OPMF00015 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone 116-B03-T3.seq, mRNA sequence.
EL683788.1:307-330
TCTGGCAAGAAGAGCTGATTCCATTCTTCC307AGTCCGCTGTCCTTCCAAAGGATTGCACCACCGTTCAGAAATGCTACATTGAAT
OPR02470 Elaeis guineensis root Elaeis guineensis cDNA clone OPVRXX_250.seq, mRNA sequence.
EL692430.1:244-267
TCTGGCAAGAAGAGCTGATTCCATTCTTCC244AGTCCGCTGTCCTTCCAAAGGATTGCACCACCGTTCAGAAATGCTACATTGAAT
EG-S31_010_B05 suspSSHS3, proliferation library (embryogenic suspension cells cultivated in medium with 2,4-D) Elaeis guineensis cDNA clone EG-S31_010_B05 5', mRNA sequence.
GH636740.1:42-65
TCTGGCAAGAAGAGCTGATTCCATTCTTCC42AGTCCGCTGTCCTTCCAAAGGATTGCACCACCGTTCAGAAATGCTACATTGAAT
Elaeis guineensis EST, clone (6lib)_isotig01579.
LM617577.1:1047-1070
TCTGGCAAGAAGAGCTGATTCCATTCTTCC1047AGTCCGCTGTCCTTCCAAAGGATTGCACCACCGTTCAGAAATGCTACATTGAAT
TSA: Elaeis guineensis isotig02714.Elguifruit mRNA sequence.
JO089967.1:1010-1033
TCTGGCAAGAAGAGCTGATTCCATTCTTCC1010AGTCCGCTGTCCTTCCAAAGGATTGCACCACCGTTCAGAAATGCTACATTGAAT
TSA: Elaeis guineensis isotig02716.Elguifruit mRNA sequence.
JO089969.1:1000-1023
TCTGGCAAGAAGAGCTGATTCCATTCTTCC1000AGTCCGCTGTCCTTCCAAAGGATTGCACCACCGTTCAGAAATGCTACATTGAAT
Elaeis guineensis clone Eg-C4-48 putative reversibly glycosylatable polypeptide (RGP1) mRNA, partial cds.
JN003478.1:329-352
TCTGGCAAGAAGAGCTGATTCCATTCTTCC329AGTCCGCTGTCCTTCCAAAGGATTGCACCACCGTTCAGAAATGCTACATTGAAT
Elaeis guineensis alpha-1,4-glucan-protein synthase mRNA, complete cds.
KC146063.1:960-983
TCTGGCAAGAAGAGCTGATTCCATTCTTCC960AGTCCGCTGTCCTTCCAAAGGATTGCACCACCGTTCAGAAATGCTACATTGAAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGTCCGCTGTCCTTCCAAAGGATT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGTCCGCTGTCCTTCCAAAGGATT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.446 | 0.437 | search_plus_done; http://172.18.8.135:50400/match?q=AGTCCGCTGTCCTTCCAAAGGATT&k=0&no_gap=0&offset=0&limit=50
0.478 | 0.032 | search_minus_done; http://172.18.8.135:50400/match?q=AATCCTTTGGAAGGACAGCGGACT&k=0&no_gap=0&offset=0&limit=42
0.478 | 0.000 | cgi_end;

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