GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-09 16:03:25, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Pyrus x bretschneideri Unigene24701_XinShao mRNA sequence.
JR618420.1:49-71
CTCTCTAACTATCTCAATCTTAATCTCTCT49ATAAGATTTTGAGTGTAGGAAATGGAATTGAAAAATCAGAAATTCAAACGATG
Logfia minima genome assembly, chromosome: 8.
OY992770.1:16650727-16650749
CATATTGCATCTCAATCTGATTATTCTTTT16650727ATAAGATTTTGAGTGTAGGAAATATATTGGAGGTATACATTTAGTTCTGTCAC
Pyrus pyrifolia cultivar Housui mRNA, clone: TsuENH014_02384m, 5' end sequence.
AB450700.1:1-23
1ATTTCCTACACTCAAAATCTTATAGAGAGATTAAGATTGAGATAGTTAGAGAG
Pyrus pyrifolia mRNA, clone: NFR1_03_84, 5' end sequence, expressed in fruit.
HX745954.1:16-38
GGATTTTTCAATTCC16ATTTCCTACACTCAAAATCTTATAGAGAGATTAAGATTGAGATAGTTAGAGAG
Epinotia demarniana genome assembly, chromosome: 26.
OX244285.1:9827008-9827030
AAGGCTTGTGCCTGTTTCAAGGTATTTGCC9827008ATTTCCTACACTCAAAATCTTATTACGACAACTTCCGAGTCCCGGGACTTTTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATAAGATTTTGAGTGTAGGAAAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATAAGATTTTGAGTGTAGGAAAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.118 | 0.109 | search_plus_done; http://172.18.8.135:50400/match?q=ATAAGATTTTGAGTGTAGGAAAT&k=0&no_gap=0&offset=0&limit=50
0.227 | 0.109 | search_minus_done; http://172.18.8.135:50400/match?q=ATTTCCTACACTCAAAATCTTAT&k=0&no_gap=0&offset=0&limit=48
0.229 | 0.002 | cgi_end;

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