GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2026-01-09 13:59:07, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Mdfrt3045d02.y1 Mdfrt Malus domestica cDNA clone Mdfrt3045d02 5', mRNA sequence.
CO756084.1:335-356
TGTATAAGGGTTGCTAAAATACTTTTTACA335ATAAGCAGTTCATTCCCCTCTTAGACACCTACTTTCTTTTCTTTTTTATTAT
Malus domestica cultivar Red Fuji chromosome 2.
CP147819.1:35296933-35296954
TGTATAAGGGTTGCTAAAATACTTTTTACA35296933ATAAGCAGTTCATTCCCCTCTTAGACACCTACTTTCTTTTCTTTTTTATTAT
Malus coronaria cultivar PI590014 chromosome 2.
CP154776.1:3005869-3005890
AATAAAAAACAAAAAACAAAGTACGTGTCT3005869AAGAGGGGAATGAACTGCTTATTTAAAAAAGTATTTTAGCAACCCTTATACA
Malus domestica cultivar WA 38 chromosome 2A.
CP165702.1:3447534-3447555
ATAATAAAAAAGAAAAGAAAGTAGGTGTCT3447534AAGAGGGGAATGAACTGCTTATTGTAAAAAGTATTTTAGCAACCCTTATACA
Malus domestica cultivar Golden Delicious chromosome 02.
CP168783.1:3445603-3445624
ATAATAAAAAAGAAAAGAAAGTAGGTGTCT3445603AAGAGGGGAATGAACTGCTTATTGTAAAAAGTATTTTAGCAACCCTTATACA
Malus domestica genome assembly, chromosome: 2.
OU744543.1:3430515-3430536
ATAATAAAAAAGAAAAGAAAGTAGGTGTCT3430515AAGAGGGGAATGAACTGCTTATTGTAAAAAGTATTTTAGCAACCCTTATACA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATAAGCAGTTCATTCCCCTCTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATAAGCAGTTCATTCCCCTCTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.368 | 0.358 | search_plus_done; http://172.18.8.135:50800/match?q=ATAAGCAGTTCATTCCCCTCTT&k=0&no_gap=0&offset=0&limit=50
0.500 | 0.133 | search_minus_done; http://172.18.8.135:50800/match?q=AAGAGGGGAATGAACTGCTTAT&k=0&no_gap=0&offset=0&limit=48
0.503 | 0.003 | cgi_end;

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