GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 07:08:47, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Australolacerta australis isolate ABU5 recombination activation protein 2 (RAG2) gene, partial cds.
JX963047.1:863-882
GATATGGGAAATGGAGCCATACTATTTGGT863ATACCTGGAAACAACAGACAGCTAATTTCAGATGCTAACTACTTTTACTT
EST3248 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 08012802-OUYI_CHAG_39_34.M13+_B05, mRNA sequence.
GE652921.1:219-238
GTGCTGTTGACGCCGGGACTGCTGTTCCAG219ATACCTGGAAACAACAGACATGTGGAGTTTGGGAGCATGAAGACTAACGG
TSA: Camellia sinensis tea_c18827 mRNA sequence.
KA297948.1:183-202
GTGCTGTTGACGCCGGGACTGCTGTTCCAG183ATACCTGGAAACAACAGACATGTGGAGTTTGGGAGTCATGAAGACTAACG
Sphaeramia orbicularis genome assembly, chromosome: 10.
LR597467.1:43468306-43468325
TTATTGCCTGCCACGCCCCAGGGGAGAATC43468306TGTCTGTTGTTTCCAGGTATGCAGGAATGGATAACATTAACAACTTAACC
Spodoptera exigua genome assembly, chromosome: 15.
LR824616.2:8758173-8758192
GTAGATTTTAAAGTATAATTTTGTTTAACA8758173TGTCTGTTGTTTCCAGGTATCAACAGGGAACAAGCGTTGGCTCGTCCAAT
Bombus hypnorum genome assembly, chromosome: 8.
OU427027.1:7676534-7676553
GCCGTAGGACCTGAACGTGGTACATACTTT7676534TGTCTGTTGTTTCCAGGTATCGTTCTCAATTCGTCAGAGAAATTCGACCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATACCTGGAAACAACAGACA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATACCTGGAAACAACAGACA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.182 | 0.174 | search_plus_done; http://172.18.8.135:50400/match?q=ATACCTGGAAACAACAGACA&k=0&no_gap=0&offset=0&limit=50
0.236 | 0.054 | search_minus_done; http://172.18.8.135:50400/match?q=TGTCTGTTGTTTCCAGGTAT&k=0&no_gap=0&offset=0&limit=47
0.238 | 0.002 | cgi_end;

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