GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 07:58:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Agrypnus murinus genome assembly, chromosome: 6.
OV816029.1:85468635-85468654
TTACCAAATTCTTTATTTATAGAAAATAAT85468635ATATCGGCATACAGAAATTAGAGATAGATTTTGTATGATACACTTGAACG
Volucella zonaria genome assembly, chromosome: 1.
OZ014530.1:207561583-207561602
ATACCAGCTAGTATCTGATGGACAAAGAGA207561583ATATCGGCATACAGAAATTATTGGTCCAGGGGAGTCCCCGTAAAGCGAAT
GQ03007.B7_K15 GQ030 - Xylem planings - daytime and seasonal Picea glauca cDNA clone GQ03007_K15 5', mRNA sequence.
EX339047.1:511-530
CGAGGAATGCGATACTGGCGGTTGTGATTC511TAATTTCTGTATGCCGATATGGTTGATGGAGTACTTAGAGGAGCTGGCAA
Picea glauca clone GQ03007_K15 mRNA sequence.
BT106672.1:511-530
CGAGGAATGCGATACTGGCGGTTGTGATTC511TAATTTCTGTATGCCGATATGGTTGATGGAGTACTTAGAGGAGCTGGCAA
Wolbachia endosymbiont of Wiebesia pumilae isolate MIAOwWpum chromosome, complete genome.
CP054557.1:556149-556168
TTCTAGAACCATAGTCTCCGCTTGTGATGG556149TAATTTCTGTATGCCGATATAATCAAACGATTTTGACTGTTCTGATAAGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATATCGGCATACAGAAATTA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATATCGGCATACAGAAATTA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.108 | 0.100 | search_plus_done; http://172.18.8.135:50400/match?q=ATATCGGCATACAGAAATTA&k=0&no_gap=0&offset=0&limit=50
0.199 | 0.091 | search_minus_done; http://172.18.8.135:50400/match?q=TAATTTCTGTATGCCGATAT&k=0&no_gap=0&offset=0&limit=48
0.201 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).