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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 10:09:48, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

CCAG13120.b3 CCAG Petrolisthes cinctipes heart, gills, whole crab (N) Petrolisthes cinctipes cDNA clone CCAG13120 5', mRNA sequence.
FE783265.1:445-464
GTTGATGTGTGTGATATTCGAAAGGAGGCT445ATATTGTTGGTGATTTTGAGGGCTACTGATTCCTCCAAGCTGTGCCAGGA
CCAG15278.b3 CCAG Petrolisthes cinctipes heart, gills, whole crab (N) Petrolisthes cinctipes cDNA clone CCAG15278 5', mRNA sequence.
FE787004.1:144-163
GTTGATGTGTGTGATATTCGAAAGGAGGCT144ATATTGTTGGTGATTTTGAGGGCTACTGATTCCTCCAAGCTGTGCCAGGA
CCAG16747.b1 CCAG Petrolisthes cinctipes heart, gills, whole crab (N) Petrolisthes cinctipes cDNA clone CCAG16747 5', mRNA sequence.
FE789544.1:658-677
GTTGATGTGTGTGATATTCGAAAGGAGGCT658ATATTGTTGGTGATTTTGAGGGCTACTGATTCCTCCAAGCTGTGCCAGGA
CCAG18561.b1 CCAG Petrolisthes cinctipes heart, gills, whole crab (N) Petrolisthes cinctipes cDNA clone CCAG18561 5', mRNA sequence.
FE792140.1:91-110
GTTGATGTGTGTGATATTCGAAAGGAGGCT91ATATTGTTGGTGATTTTGAGGGCTACTGATTCCTCCGA
CCAG25528.b1 CCAG Petrolisthes cinctipes heart, gills, whole crab (N) Petrolisthes cinctipes cDNA clone CCAG25528 5', mRNA sequence.
FE804217.1:291-310
GTTGATGTGTGTGATATTCGAAAGGAGGCT291ATATTGTTGGTGATTTTGAGGGCTACTGATTCCTCCAAGCTGTGCCAGGA
CCAG31807.b1 CCAG Petrolisthes cinctipes heart, gills, whole crab (N) Petrolisthes cinctipes cDNA clone CCAG31807 5', mRNA sequence.
FE814636.1:384-403
GTTGATGTGTGTGATATTCGAAAGGAGGCT384ATATTGTTGGTGATTTTGAGGGCTACTGATTCCTCCAAGCTGTGCCAGGA
CCAG46288.b1 CCAG Petrolisthes cinctipes heart, gills, whole crab (N) Petrolisthes cinctipes cDNA clone CCAG46288 5', mRNA sequence.
FE835934.1:582-601
GTTGATGTGTGTGATATTCGAAAGGAGGCT582ATATTGTTGGTGATTTTGAGGGCTACTGATTCCTCCAAGCTGTGCCAGGA
Sambucus nigra genome assembly, chromosome: 4.
OX422210.1:561045818-561045837
TCAGGTTTGTACACTACCAATTAGGATACC561045818ATATTGTTGGTGATTTTGAGAGCTGGACTATTAGAAAGAGATGGGGTTTG
Malachius bipustulatus genome assembly, chromosome: 6.
OU342636.1:27872108-27872127
AGTGATTCGTCAGTTATTGTCAATTATTAG27872108ATATTGTTGGTGATTTTGAGTTTTTTTTGTTATTTTTGGGTAAGGTCGTT
Platycheirus albimanus genome assembly, chromosome: 2.
OU696697.1:56695389-56695408
AGTATAGAAGTTCATGGTATAGAGTTGTTG56695389ATATTGTTGGTGATTTTGAGTAGTTACTGAATTGGTTTTTGTTGGTTTTC
Selenia dentaria genome assembly, chromosome: Z.
OU862876.1:16619849-16619868
GCCGTCACGAAATTTTTCCATGAAAGCGGC16619849ATATTGTTGGTGATTTTGAGGCTGGGCGGTGTTAAATTTATTGCCGTACC
Selenia dentaria genome assembly, chromosome: 7.
OU862882.1:3705417-3705436
GCCGTCACGAAATTTTTCCATGAAAGCGGC3705417ATATTGTTGGTGATTTTGAGGCTGGGCGGTGTTAAATTTATTGCCGTACC
Trichobilharzia szidati genome assembly, chromosome: 1.
OX235271.1:186462675-186462694
ACTCGGAACTTTAGGAAACAATAATAACAA186462675ATATTGTTGGTGATTTTGAGACTATTAGGTTGCACTAACTTTCTCTGAAA
Mecyna flavalis genome assembly, chromosome: 14.
OX439407.1:11236824-11236843
TGCTAAATGTGATTTTTGTCAAATGTTCAG11236824ATATTGTTGGTGATTTTGAGCGCTCAGATAATTTCGACGCTGACTGTACC
Brachyopa scutellaris genome assembly, chromosome: 1.
OX459112.1:140262725-140262744
GGAACAGGATGCAAAAAGTAAAAATTGTGG140262725ATATTGTTGGTGATTTTGAGATCATCAATCTCGGCGTTCCACGATGATCT
Leptopterna dolabrata genome assembly, chromosome: 8.
OX940982.1:46713444-46713463
GCCCTGCAAGTGTCGCGGACTGGTGATTTC46713444ATATTGTTGGTGATTTTGAGCAATTTCTACCGATTTGTAGATATTTGGAC
Dasysyrphus tricinctus genome assembly, chromosome: 3.
OY992532.1:83343026-83343045
CAATACTTTAAATAAAATACAATTGGAAGA83343026ATATTGTTGGTGATTTTGAGTTAAGTATTTTTTGGAATTAAATATATATT
CCAG25528.g1 CCAG Petrolisthes cinctipes heart, gills, whole crab (N) Petrolisthes cinctipes cDNA clone CCAG25528 3', mRNA sequence.
FE804218.1:385-404
TCCTGGCACAGCTTGGAGGAATCAGTAGCC385CTCAAAATCACCAACAATATAGCCTCCTTTCGAATATCACACACATCAAC
Paspalum notatum var. saurae isolate R1 chromosome 01.
CP144745.1:78734252-78734271
AAAAATATAAACAAGGGTAAAAAAAAAGTA78734252CTCAAAATCACCAACAATATTTAGAAAAAAAATCTTAAGAGATAGTTTTG
Hedera helix genome assembly, chromosome: 15.
OX359278.1:45701427-45701446
CCACAGACGAGTAAACCCATCATTGCAACA45701427CTCAAAATCACCAACAATATAAATTTGTTTCTTCCCATGAAGTTCTTTAG
Culicoides sonorensis genome assembly, scaffold: scaffold86.
LN483436.1:2886-2905
AATTTCGACAATTTCCTTTTCAATTTCCTT2886CTCAAAATCACCAACAATATTAGATGTCAATGAATTATTTGGTATTTCGT
Selenia dentaria genome assembly, chromosome: 4.
OU862879.1:39031407-39031426
GGTACGGCAATAAATTTAACACCGCCCAGC39031407CTCAAAATCACCAACAATATGCCGCTTTCATTAGATTCATTTAGAACTTG
Selenia dentaria genome assembly, chromosome: 8.
OU862883.1:31404783-31404802
GGTACGGCAATAAATTTAACACCGCCCAGC31404783CTCAAAATCACCAACAATATGCCGCTTTCATGGAAAAATTTCGTGACGGC
Selenia dentaria genome assembly, chromosome: 8.
OU862883.1:31425960-31425979
GGTACGGCAATAAATTTAACACCGCCCAGC31425960CTCAAAATCACCAACAATATGCCGCTTTCATGGAAAAATTTCGTGACGGC
Selenia dentaria genome assembly, chromosome: 15.
OU862890.1:487426-487445
GGTACGGCAATAAATTTAACACCGCCCAGC487426CTCAAAATCACCAACAATATGCCGCTTTCATGGAAAAATTTCGTGACGGC
Selenia dentaria genome assembly, chromosome: 15.
OU862890.1:7266497-7266516
GGTACGGCAATAAATTTAACACCGCCCAGC7266497CTCAAAATCACCAACAATATGCCGCTTTCATAGAAAAATTTCGTGACGGC
Patella depressa genome assembly, chromosome: 4.
OX419718.1:48704253-48704272
TACAAACAATACCACAGCAGAAACTGTTTA48704253CTCAAAATCACCAACAATATCTACCGAGCTATATATCAACATACATGTGT
Taphrorychus bicolor genome assembly, chromosome: 8.
OX638304.1:660359-660378
ACCTAGCAAATTTAAAGAGCTAAATCTTTT660359CTCAAAATCACCAACAATATTTCTAAGGCTGTATTTGGCAGAGACAGTTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATATTGTTGGTGATTTTGAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATATTGTTGGTGATTTTGAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.614 | 0.605 | search_plus_done; http://172.18.8.135:50400/match?q=ATATTGTTGGTGATTTTGAG&k=0&no_gap=0&offset=0&limit=50
0.808 | 0.194 | search_minus_done; http://172.18.8.135:50400/match?q=CTCAAAATCACCAACAATAT&k=0&no_gap=0&offset=0&limit=33
0.815 | 0.007 | cgi_end;

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