GGGenome | Results

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2025-04-11 03:00:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Sequence 6984 from patent US 10006042.
MI851711.1:710-733

GGGAAGGAGCTGGAGTTCTACATGAAAAAG710ATCCAAAGGAAGAAGGGCAAGGGTGGTGCCGGAGCTGCTTGAGTGGACTTTTGT

Sequence 6984 from patent US 10337023.
MO174878.1:710-733

GGGAAGGAGCTGGAGTTCTACATGAAAAAG710ATCCAAAGGAAGAAGGGCAAGGGTGGTGCCGGAGCTGCTTGAGTGGACTTTTGT

Sequence 6984 from patent US 10774340.
MV708625.1:710-733

GGGAAGGAGCTGGAGTTCTACATGAAAAAG710ATCCAAAGGAAGAAGGGCAAGGGTGGTGCCGGAGCTGCTTGAGTGGACTTTTGT

Sequence 6984 from patent US 11499161.
OO876406.1:710-733

GGGAAGGAGCTGGAGTTCTACATGAAAAAG710ATCCAAAGGAAGAAGGGCAAGGGTGGTGCCGGAGCTGCTTGAGTGGACTTTTGT

EG-A11_013_E08 Oil palm abnormal apex Lambda Zap Library Elaeis guineensis cDNA, mRNA sequence.
CN600608.1:8-31

GAAAAAG8ATCCAAAGGAAGAAGGGCAAGGGTGGTGCCGGAGCTGCTTGAGTGGACTTTTGT

OPR03790 Elaeis guineensis root Elaeis guineensis cDNA clone OPVRXX_A3210.seq, mRNA sequence.
EL693732.1:230-253

GGGAAGGAGCTGGAGTTCTACATGAAAAAG230ATCCAAAGGAAGAAGGGCAAGGGTGGTGCCGGAGCTGCTTGAGTGGACTTTTGT

OPR04953 Elaeis guineensis root Elaeis guineensis cDNA clone OPVRXX_B2162.seq, mRNA sequence.
EL694887.1:219-242

GGGAAGGAGCTGGAGTTCTACATGAAAAAG219ATCCAAAGGAAGAAGGGCAAGGGTGGTGCCGGAGCTGCTTGAGTGGACTTTTGT

pOP-EO03909_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO03909 5', mRNA sequence.
EY409983.1:170-193

GGGAAGGAGCTGGAGTTCTACATGAAAAAG170ATCCAAAGGAAGAAGGGCAAGGGTGGTGCCGGAGCTGCTTGAGTGGACTTTTGT

Elaeis guineensis EST, clone (6lib)_isotig21409.
LM626311.1:723-746

GGGAAGGAGCTGGAGTTCTACATGAAAAAG723ATCCAAAGGAAGAAGGGCAAGGGTGGTGCCGGAGCTGCTTGAGTGGACTTTTGT

TSA: Elaeis guineensis EgEfMPOB00194 40S ribosomal protein S8 mRNA, complete cds, mRNA sequence.
EU285008.1:634-657

GGGAAGGAGCTGGAGTTCTACATGAAAAAG634ATCCAAAGGAAGAAGGGCAAGGGTGGTGCCGGAGCTGCTTGA

Microcos paniculata chromosome 8b.
CP131454.1:19855105-19855128

GGTAAAGAGTTGGAGTTCTATACGAGGAAA19855105ATCCAAAGGAAGAAGGGCAAGGGTGCTGGAGCTGCTTAGATGTGCAGTATTTGA

Microcos paniculata chromosome 8a.
CP131463.1:19373976-19373999

GGTAAAGAGTTGGAGTTCTATACGAGGAAA19373976ATCCAAAGGAAGAAGGGCAAGGGTGCTGGAGCTGCTTAGATGTGCAGTATTTGA

Elaeis guineensis 40S ribosomal protein S8 (RPS8) mRNA, partial cds.
KC146059.1:481-504

GGGAAGGAGCTGGAGTTCTACATGAAAAAG481ATCCAAAGGAAGAAGGGCAAGGGTGGTGCCGGAGCTGCTTGAGTGGACTTTTGT

TSA: Elaeis guineensis isotig09297.Elguifruit mRNA sequence.
JO096524.1:240-263

ACAAAAGTCCACTCAAGCAGCTCCGGCACC240ACCCTTGCCCTTCTTCCTTTGGATCTTTTTCATGTAGAACTCCAGCTCCTTCCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

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Debug Info:

0.009 | 0.009 | search_start;
0.656 | 0.648 | search_plus_done; http://172.18.8.135:50400/match?q=ATCCAAAGGAAGAAGGGCAAGGGT&k=0&no_gap=0&offset=0&limit=50
0.702 | 0.046 | search_minus_done; http://172.18.8.135:50400/match?q=ACCCTTGCCCTTCTTCCTTTGGAT&k=0&no_gap=0&offset=0&limit=37
0.703 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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