GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 03:03:18, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

EG-A11_004_C07 Oil palm abnormal apex Lambda Zap Library Elaeis guineensis cDNA, mRNA sequence.
CN599912.1:30-48
AGCTTTAGTGTTCAGCTATTGGTTTCCTC30ATCCATGGCTCGCTTCCTAGGCTTTCTTTCTTTCTTTTTGCTTGCAGTT
EG-A11_006_G04 Oil palm abnormal apex Lambda Zap Library Elaeis guineensis cDNA, mRNA sequence.
CN600070.1:33-51
NNNCTTTAGTGTTCAGCTATTGGTTTCCTC33ATCCATGGCTCGCTTCCTAGGCTTTCTTTCTTTCTTTTTGCTTGCAGTT
Elaeis guineensis EST, clone (6lib)_isotig20819.
LM628619.1:11-29
TGGTTTCCTC11ATCCATGGCTCGCTTCCTAGGCTTTCTTTCTTTCTTTTTGCTTGCAGTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATCCATGGCTCGCTTCCTA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCCATGGCTCGCTTCCTA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.226 | 0.217 | search_plus_done; http://172.18.8.135:50400/match?q=ATCCATGGCTCGCTTCCTA&k=0&no_gap=0&offset=0&limit=50
0.240 | 0.014 | search_minus_done; http://172.18.8.135:50400/match?q=TAGGAAGCGAGCCATGGAT&k=0&no_gap=0&offset=0&limit=47
0.240 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).