GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-18 09:05:28, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Trifolium pratense DNA, clone:RC0335f.ab1.
DE245206.1:162-181
TGTTAAGGCGTGTGGACCCTTTTTTATTTG162ATCTCCGTCATTTACACGGCTATTAGTATATACCTGTTTTCACTACGCGC
Ilex aquifolium genome assembly, chromosome: 18.
OX637408.1:12259350-12259369
AAACATACATTCTCATACACAGGACTGATT12259350ATCTCCGTCATTTACACGGCTGCTGAAGCATCAAAACATACTGTTATTTG
Orthonevra nobilis genome assembly, chromosome: 2.
OY743225.1:128968-128987
GTAATGTTCGTGCTTTTTGTTCTTTGAATC128968ATCTCCGTCATTTACACGGCGTTGTTCCCGACCCACAATCGCCTCGCCCC
Bradyrhizobium diazoefficiens strain 41_2 chromosome, complete genome.
CP067101.1:561098-561117
CTTGCATTCCTGCGGCGCCAGCGGCTAGTT561098GCCGTGTAAATGACGGAGATGGCTGCAGGCTGATGCGGATCCTGGGACTG
Sylvicola cinctus genome assembly, chromosome: 1.
OY974082.1:63640617-63640636
AATGTGTGGGCGTCAATAAAGAACACAACA63640617GCCGTGTAAATGACGGAGATCAGCAAACCGATCACCAGCATTAGGCCCAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATCTCCGTCATTTACACGGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCTCCGTCATTTACACGGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.111 | 0.102 | search_plus_done; http://172.18.8.135:50400/match?q=ATCTCCGTCATTTACACGGC&k=0&no_gap=0&offset=0&limit=50
0.127 | 0.016 | search_minus_done; http://172.18.8.135:50400/match?q=GCCGTGTAAATGACGGAGAT&k=0&no_gap=0&offset=0&limit=47
0.128 | 0.001 | cgi_end;

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