GGGenome | Results

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Pelobates cultripes genome assembly, chromosome: 13.
OW240924.1:47826104-47826121

TTACAAGAAAACTTACAGGAACAATATATA47826104ATGGTACTCTTAAGGCATGTCCCTTTATATCTTTTACTTTTCACTTAC

Glycyrrhiza uralensis cDNA, clone: kanzou032CH05.f1, 5'-end sequence.
FS277638.1:271-288

CTAAGCCATTGAAGTTTCTTCGCCCCTATT271ATGGTACTCTTAAGGCATATTATGAAACTATGGCGGAATCAGATTTGA

Trifolium repens mRNA, clone: WCT66, unspecified EST.
FY469850.1:40-57

CCAAGCCACTGAAGTTTCTTCGCCCACATT40ATGGTACTCTTAAGGCATATTATGAAACTATGACGGAATCGGAGTTGA

TSA: Capsicum annuum MGMT_Contig7698, mRNA sequence.
JW057942.1:383-400

TAATCCACATTATACACCCATTTAACAGAT383ATGGTACTCTTAAGGCATGAAAATAAATTGCAAAGTAGAGATTGTAAT

Lotus japonicus cDNA, clone: LjFL1-079-DC02, HTC.
AK337769.1:438-455

CGAAGCCGTTGAAGTTTCTGCGACCCCATT438ATGGTACTCTTAAGGCATATTATGAAATTATGCCGAAATCTGATTTGA

Rattus norvegicus clone CH230-164J5, WORKING DRAFT SEQUENCE.
AC097300.5:76813-76830

ATCTGAGGAGAAATGAATACCGTGAGTTTA76813ATGGTACTCTTAAGGCATTGCTGGAAAGACTTATGACTGGAAGCCTCT

Rattus norvegicus clone CH230-244A18, WORKING DRAFT SEQUENCE, 3 unordered pieces.
AC113791.5:129958-129975

ATCTGAGGAGAAATGAATACCGTGAGTTTA129958ATGGTACTCTTAAGGCATTGCTGGAAAGACTTATGACTGGAAGCCTCT

Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:86460480-86460497

CGAAGCCGTTGAAGTTTCTGCGACCCCATT86460480ATGGTACTCTTAAGGCATATTATGAAATTATGCCGAAATCTGATTTGA

Trifolium repens isolate ACLI19 chromosome 03_Pall.
CP125841.1:47906502-47906519

CCAAGCCACTGAAGTTTCTTCGCCCACATT47906502ATGGTACTCTTAAGGCATATTACGAAACTATGGCGGAATCGGAGTTGA

Trifolium repens isolate ACLI19 chromosome 04_Occ.
CP125842.1:18113470-18113487

CCAAGCCACTGAAGTTTCTTCGCCCACATT18113470ATGGTACTCTTAAGGCATATTACGAAACTATGGCGGAATCGGAGTTGA

Trifolium dubium genome assembly, chromosome: 10.
OX638071.1:18038369-18038386

CCAAGCCATTGAAGTTTCTTCGTCCCCATT18038369ATGGTACTCTTAAGGCATATTATGAAACTATGGCGGAATCAGAGTTGA

Trifolium dubium genome assembly, chromosome: 14.
OX638075.1:15858864-15858881

CCAAGCCATTGAAGTTTCTTCGTCCCCATT15858864ATGGTACTCTTAAGGCATATTATGAAACTATGGCGGAATCGGAGTTGA

Cruciata laevipes genome assembly, chromosome: 8.
OY787639.1:10832930-10832947

AAGAGATTCTTCGATTCGTTTCCACAAGAT10832930ATGGTACTCTTAAGGCATGTTTGCCGGAGTTATTCTAAATCAGTTCAG

Erodium maritimum genome assembly, chromosome: 1.
OY997588.1:56465966-56465983

ACACCTAACAGTTTGTGTGACCGCATATCC56465966ATGGTACTCTTAAGGCATCTAGCATCTCATAGTCATTTTGTACCTGAT

Erodium maritimum genome assembly, chromosome: 1.
OY997588.1:56466539-56466556

GCGCCTAACAGTTTGTGTGACCGCATATCC56466539ATGGTACTCTTAAGGCATCTAGCATCTCATAGTCATTTTGTACCTGAT

Erodium maritimum genome assembly, chromosome: 1.
OY997588.1:56467112-56467129

GCGCCTAACAGTTTGTGTGACCGCATATCC56467112ATGGTACTCTTAAGGCATCTAGCATCTCATAGTCATTTTGTACCTGAT

Lathyrus aphaca genome assembly, chromosome: 3.
OZ014521.1:160669502-160669519

CCAAGCCACTGAAGTTTCTGCGCCCTCATT160669502ATGGTACTCTTAAGGCATATTATGAAACTATGGCGGAATCGGAGTTGA

Pararge aegeria genome assembly, chromosome: 15.
LR990906.1:1437087-1437104

TAACTTAATTATAACCTAAGTACTAAAATG1437087ATGGTACTCTTAAGGCATCTAAAAGATTTCGCCTTTTGGCTGACTGGC

Eristalis pertinax genome assembly, chromosome: 2.
OU026146.1:63380361-63380378

CTATTCTCTGATAAAGAGCCATGGACCCAG63380361ATGGTACTCTTAAGGCATCCCTACAAAAAAGAGGACCTGACGATCATC

Athripsodes cinereus genome assembly, chromosome: 6.
OX388310.1:29662835-29662852

CTATCAGTTAGCATGTGTTAATTTCTCCAT29662835ATGGTACTCTTAAGGCATCCGGCTACAACTGAGGCTTTATTGGTCTGC

Athripsodes cinereus genome assembly, chromosome: 13.
OX388317.1:2122676-2122693

CTATCAGTTAGCATGTGTTTATTTCTCCAT2122676ATGGTACTCTTAAGGCATCCGGCTACAACTGAGGCTTTATTGGTCTGC

Athripsodes cinereus genome assembly, chromosome: 20.
OX388324.1:18353607-18353624

CTATCAGTTAGCATGTGTTTATTTCTCCAT18353607ATGGTACTCTTAAGGCATCCGGCTACAACTGAGGCTTTATTGGTCTGC

Athripsodes cinereus genome assembly, chromosome: 23.
OX388327.1:8640060-8640077

CTATCAGTTAGCATGTGTTTATTTCTCCAT8640060ATGGTACTCTTAAGGCATCCGGCTACAACTGAGGCTTTATTGGTCTGC

TSA: Lens culinaris contig08416.Lecu mRNA sequence.
JI854674.1:66-83

TCAACTCTGATTCTGCCATAGTTTCATAAT66ATGCCTTAAGAGTACCATAATGGGGGCGCAGAAACTTCAGTGGCTTGG

TSA: Capsicum annuum MGMT_Contig11675, mRNA sequence.
JW061919.1:973-990

ATTACAATCTCTACTTTGCAATTTATTTTC973ATGCCTTAAGAGTACCATATCTGTTAAATGGGTGTATAATGTGGATTA

Rattus norvegicus clone CH230-74P18, WORKING DRAFT SEQUENCE, 3 unordered pieces.
AC134082.2:47557-47574

AGAGGCTTCCAGTCATAAGTCTTTCCAGCA47557ATGCCTTAAGAGTACCATTAAACTCACGGTATTCATTTCTCCTCAGAT

Capsicum annuum Takanotsume DNA, chromosome 7, sequence.
AP026702.1:52669343-52669360

TCTACTTTGTTTTTTTTTCAATTTATTTTC52669343ATGCCTTAAGAGTACCATATCTGTTAAATGGGTGTATAATGTGGATTA

Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 7.
CP124725.1:53464742-53464759

CTACTTTGTTTTTTTTTTCAATTTATTTTC53464742ATGCCTTAAGAGTACCATATCTGTTAAATGGGTGTATAATGTGGATTA

Trifolium repens isolate ACLI19 chromosome 03_Occ.
CP125840.1:44720835-44720852

TCAACTCCGATTCCGCCATAGTTTCGTAAT44720835ATGCCTTAAGAGTACCATAATGTGGGCGAAGAAACTTCAGTGGCTTAG

Fagus sylvatica genome assembly, chromosome: 2.
OU015762.1:42333915-42333932

TGGTACCTTATTGAACAGTTCGAAACTGTT42333915ATGCCTTAAGAGTACCATTTAATTGGGTCAGAACCATCAACAGTCCCA

Vicia faba genome assembly, chromosome: 6.
OX451741.1:627109382-627109399

TCAACTCGGATTCCGCCATAGTTTCATAAT627109382ATGCCTTAAGAGTACCATAATGGGGGCGTAAAAACTTCAGTGGCTTGG

Climacium dendroides genome assembly, chromosome: 7.
OX467088.1:21342062-21342079

TTCTATCCAATAATGAAGAAATATTAGAAG21342062ATGCCTTAAGAGTACCATTGATAATTTAATAATTTGTATGAGGCCATT

Trifolium subterraneum genome assembly, chromosome: 1.
OX637461.1:36067764-36067781

TCAACTCCGATTCCGCCATAGTTTCATAAT36067764ATGCCTTAAGAGTACCATAATGTGGGCGAAGAAACTTCAGTGGCTTGG

Trifolium fragiferum genome assembly, chromosome: 2.
OX940790.1:41813214-41813231

TCAACTCCGATTCCGCCATAGTTTCATAAT41813214ATGCCTTAAGAGTACCATAATGTGGGCGAAGAAATTTCAGTGGCTTGG

Quercus cerris genome assembly, chromosome: 4.
OY770009.1:17514672-17514689

TCCCTCTTCCTACCTTATAAGGGATGAGCC17514672ATGCCTTAAGAGTACCATTAGTCCATGGCTCATCCCTTATAAGATAGA

Lathyrus sativus genome assembly, chromosome: 7.
OZ012741.1:533718576-533718593

TCAACTCTGATTCCGCCATAGTTTCATAAT533718576ATGCCTTAAGAGTACCATAATGAGGGCGCAGAAACTTCAGTGGCTTGG

Aelia acuminata genome assembly, chromosome: 3.
OU426981.1:26754824-26754841

GCTTGATAAATTTTTGTTCTTTCATCTTCT26754824ATGCCTTAAGAGTACCATAAGCTTTGTCTCTTAATGGAACTGAATTTC

Athripsodes cinereus genome assembly, chromosome: 14.
OX388318.1:389712-389729

GCAGACCAATAAAGCCTCAGTTGTAGCCGG389712ATGCCTTAAGAGTACCATATGGAGAAATAAACACATGCTAACTGATAG

Athripsodes cinereus genome assembly, chromosome: 15.
OX388319.1:4502443-4502460

GCAGACCAATAAAGCCTCGGTTGTAGCCGG4502443ATGCCTTAAGAGTACCATATGGAGAAATAAACACATGCTAACTGATAG

Athripsodes cinereus genome assembly, chromosome: 19.
OX388323.1:19662424-19662441

ACATACTTATAAAGCCTCAGTTGCAGCCGG19662424ATGCCTTAAGAGTACCATATGGAGAAATAAACACATGCTAATTGATAG

Athripsodes cinereus genome assembly, chromosome: Z.
OX388329.1:19697898-19697915

GCAGACCAATAAAGCCTCAGTTGTAGCCGG19697898ATGCCTTAAGAGTACCATATGGAGAAATAAACACATGCTAACTGATAG

Aleiodes alternator genome assembly, chromosome: 8.
OY998104.1:6654329-6654346

TGCACAAATCATACGCGTCTAATGATACAC6654329ATGCCTTAAGAGTACCATTCCATACGTAATTGAGGCAATCGTCCATGT

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Debug Info:

0.009 | 0.009 | search_start;
0.647 | 0.638 | search_plus_done; http://172.18.8.135:50400/match?q=ATGGTACTCTTAAGGCAT&k=0&no_gap=0&offset=0&limit=50
0.803 | 0.156 | search_minus_done; http://172.18.8.135:50400/match?q=ATGCCTTAAGAGTACCAT&k=0&no_gap=0&offset=0&limit=26
0.816 | 0.013 | cgi_end;

Summary:

Results:

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