GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 16:48:00, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus genomic DNA, chromosome 1, clone: LjT11G20, TM0187.
AP009955.1:17905-17927
ATATATATAAGCAGCATGGGAGCATCAAAA17905CCTTCTATTCTTTGGAAATAAATAATAATGCAAATTTACATGTGTTTGGCATA
Lotus japonicus genomic DNA, chromosome 2, clone: LjT38O12, TM0324.
AP009072.1:3836-3858
ATATATATAAGCAGCATGGGAGCATCAAAA3836CCTTCTATTCTTTGGAAATAAATAATAATGCAAATTTACATGTGTTTGGCATA
Lotus japonicus genomic DNA, chromosome 2, clone: LjB13K21, BM1048.
AP010381.1:79294-79316
ATATATATAAGCAGCATGGGAGCATCAAAA79294CCTTCTATTCTTTGGAAATAAATAATAATGCAAATTTACATGTGTTTGGCATA
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:898926-898948
ATATATATAAGCAGCATGGGAGCATCAAAA898926CCTTCTATTCTTTGGAAATAAATAATAATGCAAATTTACATGTGTTTGGCATA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATTTATTTCCAAAGAATAGAAGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATTTATTTCCAAAGAATAGAAGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.097 | 0.088 | search_plus_done; http://172.18.8.135:50400/match?q=ATTTATTTCCAAAGAATAGAAGG&k=0&no_gap=0&offset=0&limit=50
0.111 | 0.014 | search_minus_done; http://172.18.8.135:50400/match?q=CCTTCTATTCTTTGGAAATAAAT&k=0&no_gap=0&offset=0&limit=50
0.115 | 0.003 | cgi_end;

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