GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 07:02:29, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus genomic DNA, chromosome 1, clone: LjB15M22, BM1745a.
AP010458.1:41170-41189
TCATGTACATTCATCATTCATAGACTACTA41170CAAAATACATACATCCCGAGATACTCTTTTTTGTTTCTATGTATCTATGC
Diaphorina citri isolate DC chromosome 9.
CP125321.1:19207151-19207170
CTAATCATAAGGTCAACAAATATATCGATA19207151CAAAATACATACATCCCGAGACTAATAATAATGTAAACAGCATGCACGAC
Eudasyphora cyanicolor genome assembly, chromosome: 3.
OZ005736.1:21526304-21526323
ATCGGTTTGTTATTCATTGATATTTAATTT21526304CAAAATACATACATCCCGAGTTTCAGAAAAAAATTTTCAAAAAAATGTAT
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:103608665-103608684
GCATAGATACATAGAAACAAAAAAGAGTAT103608665CTCGGGATGTATGTATTTTGTAGTAGTCTATGAATGATGAATGTACATGA
Microplitis manilae isolate GZ chromosome 6.
CP092725.1:170896-170915
TGGAGGCTCAAATCATCTTTTTAACTTTGA170896CTCGGGATGTATGTATTTTGATAAAAAAGTTTGAAAGGATCATGAATTTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAAAATACATACATCCCGAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAAAATACATACATCCCGAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.115 | 0.106 | search_plus_done; http://172.18.8.135:50400/match?q=CAAAATACATACATCCCGAG&k=0&no_gap=0&offset=0&limit=50
0.146 | 0.031 | search_minus_done; http://172.18.8.135:50400/match?q=CTCGGGATGTATGTATTTTG&k=0&no_gap=0&offset=0&limit=47
0.147 | 0.001 | cgi_end;

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