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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 12:33:48, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

KS14026F07 KS14 Capsicum annuum cDNA, mRNA sequence.
GD059863.1:146-166
GGGTTCACAAACATGACTAGACCTGGCTTT146CAACCTTCTCCAGTTCCCATGATTCCTAATACTTATCGACAACATCGGCAG
KS14036D08 KS14 Capsicum annuum cDNA, mRNA sequence.
GD060764.1:146-166
GGGTTCACAAACATGACTAGACCTGGCTTT146CAACCTTCTCCAGTTCCCATGATTCCTAATACTTATCGACAACATCGGCAG
KS14048G08 KS14 Capsicum annuum cDNA, mRNA sequence.
GD061900.1:146-166
GGGTTCACAAACATGACTAGACCTGGCTTT146CAACCTTCTCCAGTTCCCATGATTCCTAATACTTATCGACAACATCGGCAG
KS14049A03 KS14 Capsicum annuum cDNA, mRNA sequence.
GD061919.1:146-166
GGGTTCACAAACATGACTAGACCTGGCTTT146CAACCTTCTCCAGTTCCCATGATTCCTAATACTTATCGACAACATCGGCAG
KS17045B02 KS17 Capsicum annuum cDNA, mRNA sequence.
GD079679.1:565-585
GGGTTCACAAACATGACTAGACCTGGCTTT565CAACCTTCTCCAGTTCCCATGATTCCTAATACTTATCGACAACATCGGCAG
Solanum tuberosum cultivar Solyntus chromosome 5.
CP055238.1:52993609-52993629
GGGTTCACAAACACCCTCAGACCTAGCTAT52993609CAACCTTCTCCAGTTCCCATGATTCCTAATACTTATCGACCATATCGGCAG
Solanum verrucosum cultivar 11H23 chromosome 5.
CP133616.1:43813437-43813457
GGGTTCACAAACACCCTCAGACCTAGCTAT43813437CAACCTTCTCCAGTTCCCATGATTCCTAATACTTATTGACCATATCGGCAG
TSA: Capsicum annuum MGMT_Contig1433, mRNA sequence.
JW051677.1:133-153
CTGCCGATGTTGTCGATAAGTATTAGGAAT133CATGGGAACTGGAGAAGGTTGAAAGCCAGGTCTAGTCATGTTTGTGAACCC
Capsicum annuum Takanotsume DNA, chromosome 10, sequence.
AP026705.1:196027594-196027614
CAATTGCTATGACTATTTACGTGGACTAAC196027594CATGGGAACTGGAGAAGGTTGAAAGCCAGGTCTAGTCATGTTTGTGAACCC
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 10.
CP124722.1:200432349-200432369
CAATTGCTATGACTATTTACGTGGACTAAC200432349CATGGGAACTGGAGAAGGTTGAAAGCCAGGTCTAGTCATGTTTGTGAACCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAACCTTCTCCAGTTCCCATG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAACCTTCTCCAGTTCCCATG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.470 | 0.461 | search_plus_done; http://172.18.8.135:50400/match?q=CAACCTTCTCCAGTTCCCATG&k=0&no_gap=0&offset=0&limit=50
0.514 | 0.044 | search_minus_done; http://172.18.8.135:50400/match?q=CATGGGAACTGGAGAAGGTTG&k=0&no_gap=0&offset=0&limit=43
0.516 | 0.002 | cgi_end;

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