GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 21:36:19, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Arachis hypogaea DNA, clone: AHGS40B18.
DH961971.1:38-57
CCGAAACACTGAACTGTTAATGCTAATTAA38CAAGGCTAAATTACACCGGCTTAAATTAAATTTCAACACACACACACACA
Arachis hypogaea cultivar Shitouqi chromosome B09.
CP031001.1:144063569-144063588
CCGAAACACTGAACTGTTAATGCTAATTAA144063569CAAGGCTAAATTACACCGGCTTAAATTAAATTTCAACACACACACACACA
Nomada fucata genome assembly, chromosome: 4.
OX411278.1:6221312-6221331
TGCCGCAACACACGGCTGGTAATCGACAAT6221312CAAGGCTAAATTACACCGGCGTTCCCATATTACACACGGGGACAGGATCT
Nomada ferruginata genome assembly, chromosome: 15.
OY757227.1:6397821-6397840
TGCCGCAACACACGGCTGGTAATCGACAAT6397821CAAGGCTAAATTACACCGGCGTTCCCATATTACACACGGGGACAGGATCT
Arachis hypogaea DNA, clone: AHGS47A18.
DH961701.1:214-233
TGTGTGTGTGTGTGTTGAAATTTAATTTAA214GCCGGTGTAATTTAGCCTTGTTAATTAGCATTAACAGTTCAGTGTTTCGG
Arachis ipaensis cultivar K30076 chromosome 09.
CP049900.1:143462271-143462290
TGTGTGTGTGTGTGTTGAAATTTAATTTAA143462271GCCGGTGTAATTTAGCCTTGTTAATTAGCATTAACAGTTCAGTGTTTCGG
Nomada fabriciana genome assembly, chromosome: 4.
OU015691.1:14006176-14006195
AGATCCTGTCCCCGTGTGTAATATGGGAAC14006176GCCGGTGTAATTTAGCCTTGATTGTCGATTACCAGCCGTGTGTTGCGGCA
Nomada panzeri genome assembly, chromosome: 13.
OX637842.1:7120266-7120285
AGATCCTGTCCCCGTGTGTAATATGGGAAC7120266GCCGGTGTAATTTAGCCTTGATTGTCGATTACCAGCCGTGTGTTGCGGCA
Nomada ruficornis genome assembly, chromosome: 16.
OX637861.1:3371824-3371843
AGATCCTGTCCCCGTGTGTAATATGGGAAC3371824GCCGGTGTAATTTAGCCTTGATTGTCGATTACCAGCCGTGTGTTGCGGCA
Nomada flava genome assembly, chromosome: 14.
OX637914.1:4847782-4847801
AGATCCTGTCCCCGTGTGTAATATGGGAAC4847782GCCGGTGTAATTTAGCCTTGATTGTCGATTACCAGCCGTGTGTTGCGGCA
Nomada hirtipes genome assembly, chromosome: 16.
OX637931.1:5442844-5442863
AGATCCTGTCCCCGTGTGTAATATGGGAAC5442844GCCGGTGTAATTTAGCCTTGATTGTCGATTACCAGCCGTGTGTTGCGGCA
Nomada lathburiana genome assembly, chromosome: 14.
OY763910.1:4101007-4101026
AGATCCTGTCCCCGTGTGTAATATGGGAAC4101007GCCGGTGTAATTTAGCCTTGATTGTCGATTACCAGCGGTGTGTTGCGGCA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAAGGCTAAATTACACCGGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAAGGCTAAATTACACCGGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.111 | 0.102 | search_plus_done; http://172.18.8.135:50400/match?q=CAAGGCTAAATTACACCGGC&k=0&no_gap=0&offset=0&limit=50
0.160 | 0.049 | search_minus_done; http://172.18.8.135:50400/match?q=GCCGGTGTAATTTAGCCTTG&k=0&no_gap=0&offset=0&limit=46
0.166 | 0.005 | cgi_end;

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