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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-14 08:53:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

UCRCS01_05db04_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05db04, mRNA sequence.
CB293232.1:109-130
CTTTCAGTATGCAAATAACAACTACTAAAA109CAATAATGTTAGGCTGGATGGATATCATAGACCATTATTATTATTATTATTA
UCRCS03_04I12_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa04I12, mRNA sequence.
CF837353.1:243-264
CTTTCAGTATGCAAATAACAACTACTAAAA243CAATAATGTTAGGCTGGATGGATATCATAGTCCATTATTATTATTATTATTA
UCRCS11_06J23_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006J23, mRNA sequence.
DN621370.1:325-346
CTTTCAGTATGCAAATAACAACTACTAAAA325CAATAATGTTAGGCTGGATGGATATCATAGTCCATTATTATTATTATTATTA
UCRCS01_05db04_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05db04, mRNA sequence.
CB293233.1:645-666
TAATAATAATAATAATAATGGACTATGATA645TCCATCCAGCCTAACATTATTGTTTTAGTAGTTGTTATTTGCATACTGAAAG
UCRCS03_04I12_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa04I12, mRNA sequence.
CF837354.1:639-660
TAATAATAATAATAATAATGGACTATGATA639TCCATCCAGCCTAACATTATTGTTTTAGTAGTTGTTATTTGCATACTGAAAG
Citrus unshiu mRNA, clone: ANT0756, 5'-end sequence, expressed in anther.
DC883924.1:659-680
TAATAATAATAATAATAATGGACTATGATA659TCCATCCAGCCTAACATTATTGTTTTAGTAGTTGTTATTTGCATACTGAAAG
IC0AAA3DA04RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY275927.1:640-661
TAATAATAATAATAATAATGGACTATGATA640TCCATCCAGCCTAACATTATTGTTTTAGTAGTTGTTATTTGCATACTGAAAG
CR05-C1-100-023-G11-CT.F Mandarin leaf, greenhouse plant Citrus reticulata cDNA, mRNA sequence.
EY760116.1:645-666
TAATAATAATAATAATAATGGACTATGATA645TCCATCCAGCCTAACATTATTGTTTTAGTAGTTGTTATTTGCATACTGGGAG
IC0AAA3DA04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA3DA04, mRNA sequence.
FC884028.1:640-661
TAATAATAATAATAATAATGGACTATGATA640TCCATCCAGCCTAACATTATTGTTTTAGTAGTTGTTATTTGCATACTGAAAG
KN0AAP7YD06FM1 TF Citrus clementina cDNA clone KN0AAP7YD06, mRNA sequence.
FC926615.1:640-661
TAATAATAATAATAATAATGGACTATGATA640TCCATCCAGCCTAACATTATTGTTTTAGTAGTTGTTATTTGCATACTGAAAG
ESTs_516 Citrus Floral Organs and Fruitlets cDNA Library Citrus reticulata cDNA 5', mRNA sequence.
GO344134.1:268-289
TAATAATAATAATAATAATGGACTATGATA268TCCATCCAGCCTAACATTATTGTTTTAGTAGTTGTTATTTGCATACTGAAAG
Citrus sinensis genome assembly, chromosome: 7.
OY754324.1:7089407-7089428
TAATAATAATAATAATAATGGACTATGATA7089407TCCATCCAGCCTAACATTATTGTTTTAGTAGTTGTTATTTGCATACTGAAAG

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