GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-16 03:14:02, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Eilema depressum genome assembly, chromosome: 12.
OU612024.1:3375227-3375246
TTTTCGAATTCGGGACAACTTTTGTGGGAT3375227CAATACGGAACAACCCAACCAGAGGGGTTAGCACGAAAAACTATCGTAAT
Trifolium repens mRNA, clone: WCC19g16, unspecified EST.
FY460747.1:328-347
CTGGGCTCTTTCGAAACGGCCCAATTATTA328GGTTGGGTTGTTCCGTATTGCCCAGGAGGGGATCTCAATGTGCTTCGTTA
Trifolium repens mRNA, clone: WCC23j13_006, unspecified EST.
FY462223.1:347-366
CTGGGCTCTTTCGAAACGGCCCAATTATTA347GGTTGGGTTGTTCCGTATTGCCCAGGAGGGGATCTCAATGTGCTTCGTTA
Trifolium repens isolate ACLI19 chromosome 06_0cc.
CP125846.1:57129809-57129828
CTGGGCTCTTTCGAAACGGCCCAATTATTA57129809GGTTGGGTTGTTCCGTATTGCCCAGGAGGGGATCTCAATGTGCTCCGTTA
Spirosoma radiotolerans strain DG5A, complete genome.
CP010429.1:2115990-2116009
TCACAACTTCTTGAATACCAATGTGGTCAG2115990GGTTGGGTTGTTCCGTATTGTGTTGCCGGTCAACAATATGTACGTTCTCC
Terebella lapidaria genome assembly, chromosome: 8.
OX424562.1:17996703-17996722
AATACATCGAACCAAAGCATTTCCGCGAAC17996703GGTTGGGTTGTTCCGTATTGCCATTCAACCATGCGGATGTCATACTGAGG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAATACGGAACAACCCAACC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAATACGGAACAACCCAACC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.110 | 0.101 | search_plus_done; http://172.18.8.135:50400/match?q=CAATACGGAACAACCCAACC&k=0&no_gap=0&offset=0&limit=50
0.315 | 0.205 | search_minus_done; http://172.18.8.135:50400/match?q=GGTTGGGTTGTTCCGTATTG&k=0&no_gap=0&offset=0&limit=49
0.318 | 0.004 | cgi_end;

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