GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-12 00:07:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Acomys russatus genome assembly, chromosome: 8.
LR877219.1:70586242-70586258
AGACATCCGGACACGGGCTTTGGCAGACCT70586242CAATCACAAGTCCTCCAGTATTGCTTTCAGAAACCCATCCCACACTT
Acomys dimidiatus genome assembly, chromosome: 4.
OU015377.1:138387179-138387195
GACATTCCGGACGTGGGCTTTGGCAGACCT138387179CAATCACAAGTCCTCCACTATTTCAGAAACCCATCCCACACTTGGCC
Heterocephalus glaber genome assembly, chromosome: 15.
OX090955.1:30560121-30560137
TGATTAAGATAGTAACAGTACTAAAATGAA30560121CAATCACAAGTCCTCCATGAAAGCAAAGAATTAGAACATGTCTAGCA
Apodemus sylvaticus genome assembly, chromosome: 8.
OX359305.1:116828634-116828650
GACGCCATGGACGCCATGGACGCTGGGAGC116828634CAATCACAAGTCCTCCACGGCCTGCACAACTGCTTCTCCAGCCCCTG
Sarcophilus harrisii genome assembly, chromosome: 1.
LR735554.1:590743167-590743183
AAGATTTCACTAAATCCACACCCAATCATA590743167CAATCACAAGTCCTCCACAGGGTTTTCATTTAATATTCTAGAGATCT
Meles meles genome assembly, chromosome: 17.
OV277458.1:7270151-7270167
TGCATTAGGTAGTTAGAAGTCTGCCAGGGT7270151CAATCACAAGTCCTCCAAAGCAAGTTACATAACCTTGTGGTTTGCCT
Lateolabrax maculatus chromosome Lm13.
CP027274.1:19270130-19270146
TACTGTGAAGTTTTCCAACTGACGGGTTGC19270130CAATCACAAGTCCTCCATGAGTTTAGATTTCCCGCACTTAGTGCAAT
Apteryx australis mantelli genome assembly, scaffold: scaffold976.
LK065545.1:59007-59023
AGACACCTAAACCCAGAAAGCTTCTCTCCC59007CAATCACAAGTCCTCCACTTTTTGCTTTCCTAGTGCCTCAGGAGGAT
Gouania willdenowi genome assembly, chromosome: 3.
LR132003.1:33124467-33124483
ATACACGCTGATGACAACTGAGCTGCCATG33124467CAATCACAAGTCCTCCAACATGTGTTGCTCAAGGACACTTTTAGACA
Erpetoichthys calabaricus genome assembly, chromosome: 7.
LR536438.2:177766712-177766728
TAGATAAAAGGAAAAGAAAAATTCTAATCA177766712CAATCACAAGTCCTCCAGAATGATCAGAAGGTTTCTGAGTTGTCTGT
Sparus aurata genome assembly, chromosome: 6.
LR537126.1:219441-219457
CCAATCACCAAGCCCTGTTGGTGTGGGGAC219441CAATCACAAGTCCTCCAGCGAGGAGTAGTGACATCATAGATAACATC
Acanthopagrus latus isolate v.2019 genome assembly, chromosome: 6.
LR884465.1:140330-140346
CCAATCACCAAGCCCTGTCGGTGTGGGGAC140330CAATCACAAGTCCTCCAGCGAGGAGTAGTGACGTCACAGATGACATC
Trachurus trachurus genome assembly, chromosome: 1.
LR991628.1:24393726-24393742
GCACTGACCAAAATCAGTAATGCCCACAAT24393726CAATCACAAGTCCTCCATGTAGTTTGGTAAGTTATCTTGATAATGTC
Trachurus trachurus genome assembly, chromosome: 15.
LR991643.1:21070405-21070421
AGTTTTTAAGTGTCCAGAAATACACCAGAC21070405CAATCACAAGTCCTCCATGTCATTACCAGATACCACCGTCCCACTTT
Rana temporaria genome assembly, chromosome: 4.
LR991683.1:428370845-428370861
TTTTTATAGGGGGGGAAAAAAAAGTCTTTA428370845CAATCACAAGTCCTCCAGCAGCAGTGAGAATTACAAAAAAAAAAATT
Anas platyrhynchos genome assembly, chromosome: 2.
LS423612.1:24213419-24213435
TCTCTATGACTGGAAACAGTGGTCTCTGTA24213419CAATCACAAGTCCTCCATTCTTCATTACATATTTGAGAAGCTATGTA
Hyperoplus immaculatus genome assembly, chromosome: 3.
OX442351.1:32196846-32196862
ATGAAGTTTTAATTGAACCGGCACTCACTC32196846CAATCACAAGTCCTCCAATACATTGTCTGGGTTTATTCTGTGCACAC
Tetrao urogallus genome assembly, chromosome: 12.
OX596306.1:18607539-18607555
TGGCACCAGAGATACAATTCCTTATGAATG18607539CAATCACAAGTCCTCCAGGACAAGGAAAGTTCATAAACCAGAGGCTC
Xyrichtys novacula genome assembly, chromosome: 6.
OY660869.1:20408241-20408257
TCCATTCTGCTTTGTGTGAAGGTCCACTGA20408241CAATCACAAGTCCTCCATAGAAACAGAAACAGTTAATTTTGTTTCCC
Psittacula echo genome assembly, chromosome: 4.
OY725423.1:103014658-103014674
TATGTTTTCGCTGCTATGCTGCTGACATCC103014658CAATCACAAGTCCTCCAGCAGTACAATCAATCGCAAGCCAGCTTCAG
Gymnoscopelus microlampas genome assembly, chromosome: 12.
OY732714.1:53582612-53582628
TCCAAGTTCCATCACAAGTCCTCCAACCAG53582612CAATCACAAGTCCTCCAACCAGCAAACACACTCTTAACACATTGCCG
Sprattus sprattus genome assembly, chromosome: 11.
OY735295.1:17364825-17364841
TGGCTTCCCTCACTCCCACCCCCACCCCCA17364825CAATCACAAGTCCTCCAGAGGATCTCGTCCTGGAAGGCTTCCTTTGA
Fringilla coelebs genome assembly, chromosome: 3.
OY740726.1:13458690-13458706
GAAACATGCATGAGGGGTGAAATTCTGTAC13458690CAATCACAAGTCCTCCAATGCTGACTGAGGAACCCTGCACAGAAATA
Chelon labrosus genome assembly, chromosome: 22.
OY741310.1:17462552-17462568
GCCGCCGGTCTTTTCGGGTTTGCCTGTTAT17462552CAATCACAAGTCCTCCATATTTGAACTTTTTGACAAAATACCAAACT
Anas acuta genome assembly, chromosome: 2.
OZ009963.1:24968640-24968656
TCTCTATGACTGGAAACAGTGGTCTCTGTA24968640CAATCACAAGTCCTCCATTCTTCATTACATATTTGAGAAGCTATGTA
Asterina pectinifera cDNA clone:ape1k09, 3' end.
DB399008.1:117-133
TGAAGTTGAGGAGCAGACTTTTAATTGAGT117CAATCACAAGTCCTCCAGTCTCAAGTCAAGTCACAGGCTATAGTCCG
Asterina pectinifera cDNA clone:ape22c20, 3' end.
DB406174.1:115-131
TGAAGTTGAGGAGCAGACTTTTAATTGAGT115CAATCACAAGTCCTCCAGTCTCAAGTCAAGTCACAGGCTATAGTCTG
Asterina pectinifera cDNA clone:ape35l18, 3' end.
DB410788.1:115-131
TGAAGTTGAGGAGTGGACTTTTAAATGAGT115CAATCACAAGTCCTCCAGTCTCAAGTCAAGTCACAGGCTATAGTCCG
93990135 Sea Urchin primary mesenchyme cell cDNA library Strongylocentrotus purpuratus cDNA clone PMCSPR2-184M23 3', mRNA sequence.
DN574238.1:708-724
CTTACCAAAGAGTTACGATTGATCCAAAAT708CAATCACAAGTCCTCCAATCAATCGCAAGTGTGCAGTCTCCTATCTC
93942803 Sea Urchin primary mesenchyme cell cDNA library Strongylocentrotus purpuratus cDNA clone PMCSPR2-185E24 5', mRNA sequence.
DN580711.1:453-469
ATCTTACGAAGACTTGCGATTGATCCAAAT453CAATCACAAGTCCTCCAATCAATCGCAAGTTTGCAGTCTCTTATCTC
TSA: Patiria miniata isotig04308.Pminbgast mRNA sequence.
HP086491.1:1481-1497
TGAAGTTGAGGAGCAGACTTTTAATCGAGT1481CAATCACAAGTCCTCCAGTCTCAAGTCAAGTCACAGGCTATAGTCTG
TSA: Patiria miniata isotig04309.Pminbgast mRNA sequence.
HP086492.1:1490-1506
TGAAGTTGAGGAGCAGACTTTTAATCGAGT1490CAATCACAAGTCCTCCAGTCTCAAGTCAAGTCACAGGCTATAGTCTG
TSA: Patiria miniata isotig19519.Pminagast mRNA sequence.
HP124328.1:273-289
TGAAGTTGAGGAGCAGACTTTTAATTGAGT273CAATCACAAGTCCTCCAGTCTCAAGTCAAGTCACAGGCTATAGTCTG
TSA: Strongylocentrotus purpuratus WHL22.28690.1 mRNA sequence.
JT099274.1:4011-4027
TTGATATAAAGACTTGCAATTAATTTGGAT4011CAATCACAAGTCCTCCAATCAACCGCAGTTTGCAGTCTCCTATCTCT
TSA: Strongylocentrotus purpuratus WHL22.360739.0 mRNA sequence.
JT121376.1:3732-3748
GTCTTACAAAGAGTTACGATAGATCCCAAT3732CAATCACAAGTCCTCCAATCAATCGCAAGTTTGCAGTGTCCTATCTC
Strongylocentrotus purpuratus clone R3-12A1, WORKING DRAFT SEQUENCE, 20 unordered pieces.
AC149913.2:224517-224533
ATCTTACAAAGCATTACGATTGATCCACAT224517CAATCACAAGTCCTCCAATCAATCGCAAGTTTGCAGTCTCCTATCTC
Strongylocentrotus purpuratus clone R3-3117B4, WORKING DRAFT SEQUENCE, 28 unordered pieces.
AC168503.2:60091-60107
GTCTTACAAAGAGTTGCGATTGATCTAAAT60091CAATCACAAGTCCTCCAATCAATCGCAAGTTTGCAGTCTCCTATCTC
Strongylocentrotus purpuratus clone R3-3046L7, WORKING DRAFT SEQUENCE, 22 unordered pieces.
AC168603.2:44992-45008
CTATCTTAAAAAGAGTTGCGATTGATAAAT44992CAATCACAAGTCCTCCATTTAATCGCAAGTTTGCAGTCTCCTATCTC
Strongylocentrotus purpuratus clone R3-3017H18, WORKING DRAFT SEQUENCE, 29 unordered pieces.
AC168652.2:89718-89734
GTCTTACAAAGAGTTACAATTGATCCAAAT89718CAATCACAAGTCCTCCAATCAATCGCAAGTTTGCAGTCTTCAATCTC
Strongylocentrotus purpuratus clone R3-1115B1, WORKING DRAFT SEQUENCE, 10 unordered pieces.
AC174134.2:24125-24141
TACAAAGAGTTACGATTTAGTGATCCAAAT24125CAATCACAAGTCCTCCAATCAATCGCAAGTTTGCAGTCTCCTATCTC
Strongylocentrotus purpuratus clone R3-3073E1, WORKING DRAFT SEQUENCE, 10 unordered pieces.
AC174165.2:25477-25493
GTCTTATAAAGAGTTGCGATTAATCCACGT25477CAATCACAAGTCCTCCATCAGTTATTTTCATTGCAGTCTCTTTTCTC
Strongylocentrotus purpuratus clone R3-33I20, WORKING DRAFT SEQUENCE, 8 unordered pieces.
AC174961.2:88356-88372
GTCTTATGAAGAATTGCAATCGATCTGAAT88356CAATCACAAGTCCTCCAATCAATCGCAAGTTTCCAGTCTCCTGTCTC
Strongylocentrotus purpuratus clone R3-15N9, WORKING DRAFT SEQUENCE, 26 unordered pieces.
AC175929.1:81772-81788
GTCTTACAAAGAGTTGCATTTGTTCCAAAT81772CAATCACAAGTCCTCCAATCAATCGTAAGTTTGCAATCTCCTATTTC
Strongylocentrotus purpuratus clone R3-18P16, WORKING DRAFT SEQUENCE, 30 unordered pieces.
AC176055.1:114973-114989
GTCTTACATAGAGTTGTGATAGATCCAAAT114973CAATCACAAGTCCTCCAATCAATCGCAAGGTTTCAATCCCCCATCTC
Strongylocentrotus purpuratus clone R3-3080H22, WORKING DRAFT SEQUENCE, 21 unordered pieces.
AC176635.1:59764-59780
ATCTTACAAAGCATTACGATTGATCCACAT59764CAATCACAAGTCCTCCAATCAATCGCAAGTTTGCAGTCTCCTATCTC
Strongylocentrotus purpuratus clone R3-3088F12, WORKING DRAFT SEQUENCE, 21 unordered pieces.
AC176686.1:80929-80945
AGTTGCGAATTTTTTGCGATAGATCCAAAT80929CAATCACAAGTCCTCCAATCGATAATATTGCAAGTTTGCAGTCTCCT
Strongylocentrotus purpuratus clone R3-1032I10, WORKING DRAFT SEQUENCE, 19 unordered pieces.
AC177349.1:19337-19353
GTCTTACAAAGAGTTGCGATTGATCCGAAT19337CAATCACAAGTCCTCCAATCGATTCCAAGTTTACGGTCTCCTATATA
Strongylocentrotus purpuratus clone R3-52I03, WORKING DRAFT SEQUENCE, 23 unordered pieces.
AC177365.1:46955-46971
GTATTCTAAAGAGTTGCGATTGATCCAAAT46955CAATCACAAGTCCTCCATCCATCGCAAGTTTGCAGTCCTCCGTCTCT
Strongylocentrotus purpuratus clone R3-1027N13, WORKING DRAFT SEQUENCE, 39 unordered pieces.
AC177493.1:181397-181413
GTCTTACATAGAGTTGTGATAGATCCAAAT181397CAATCACAAGTCCTCCAATCAATCGCAAGGTTTCAATCCCCCATCTC
Strongylocentrotus purpuratus clone R3-3059O06, WORKING DRAFT SEQUENCE, 17 unordered pieces.
AC178078.1:124233-124249
NNNTTACAAAGAGTTGCGATTGATCCAAAT124233CAATCACAAGTCCTCCAATCAATAGCAAGTTTGCAGTCTCCTATATC
Strongylocentrotus purpuratus clone R3-3082D3, WORKING DRAFT SEQUENCE, 16 unordered pieces.
AC178183.1:55055-55071
ATCTTACAAAGAGTTAGGATTGATCCAAAT55055CAATCACAAGTCCTCCAATCAATCACAAGTTTGCAGTCTCCTATCTC
Strongylocentrotus purpuratus clone R3-3114F16, WORKING DRAFT SEQUENCE, 21 unordered pieces.
AC178431.1:90669-90685
CTGCGATTGATTGGAGGAATTGTGATTAAT90669CAATCACAAGTCCTCCAATCAAGAGTTACGATTCTGATCCATCGTAA
Strongylocentrotus purpuratus clone R3-12N10, WORKING DRAFT SEQUENCE, 53 unordered pieces.
AC178720.1:151436-151452
GTCTTACAAAGAGTTGCGATTGATCCAAAT151436CAATCACAAGTCCTCCAATCAATCGCACGTTTGCAGTCTCCTATCTC
Strongylocentrotus purpuratus clone R3-21K07, WORKING DRAFT SEQUENCE, 23 unordered pieces.
AC178787.1:6599-6615
GTCTTATAAAGAGTTGCGATTAATCCACGT6599CAATCACAAGTCCTCCATCAGTTATTTTCATTGCAGTCTCTTTTCTC
Strongylocentrotus purpuratus clone R3-3114F24, WORKING DRAFT SEQUENCE, 15 unordered pieces.
AC178890.1:42439-42455
CTGCGATTGATTGGAGGAATTGTGATTAAT42439CAATCACAAGTCCTCCAATCAAGAGTTACGATTCTGATCCATCGTAA
Strongylocentrotus purpuratus clone R3-3115A3, WORKING DRAFT SEQUENCE, 29 unordered pieces.
AC178911.1:167645-167661
GTCTTACAAAGAGTTGCGATTGATCTAAAT167645CAATCACAAGTCCTCCAATCAATCGCAAGTTTGCAGTCTCCTATCTC
Strongylocentrotus purpuratus clone R3-32F23, WORKING DRAFT SEQUENCE, 17 unordered pieces.
AC179006.1:39260-39276
TTCTTATAAAGAGTTGCGATGGATCCAAAT39260CAATCACAAGTCCTCCAATCAATTGCAAGTTTGCAGTCTCCTATCTC
Strongylocentrotus purpuratus clone R3-1102E7, WORKING DRAFT SEQUENCE, 30 unordered pieces.
AC179348.1:87049-87065
GTCTTACAAAGAGTTGCGATTGATCCAAAT87049CAATCACAAGTCCTCCAATCAACCACAAGTTTGCAGTCCTGCTCCTA
Strongylocentrotus purpuratus clone R3-1029F2, WORKING DRAFT SEQUENCE, 12 unordered pieces.
AC179595.1:12374-12390
ATCTTACAAAGCATTACGATTGATCCACAT12374CAATCACAAGTCCTCCAATCAATCGCAAGTTTGCAGTCTCCTATCTC
Strongylocentrotus purpuratus clone R3-1024G02, WORKING DRAFT SEQUENCE, 23 unordered pieces.
AC179657.1:58797-58813
GTCTTACAAAGAGTTACGATTGATCCAAAT58797CAATCACAAGTCCTCCAATCAATCGCAAGTTTGCAAACTCCTATCTC
Strongylocentrotus purpuratus clone R3-1021J21, WORKING DRAFT SEQUENCE, 17 unordered pieces.
AC179699.1:26034-26050
GTCTTATAAAGAGTTGTGATTGGTCCAAAT26034CAATCACAAGTCCTCCAATCAATCCTAAGTTTACAGTCTCCTATCCA
Strongylocentrotus purpuratus clone R3-1021J21, WORKING DRAFT SEQUENCE, 17 unordered pieces.
AC179699.1:68205-68221
GTCTTACAAACAGTTACGATTGATCCAAAT68205CAATCACAAGTCCTCCAATCAATCGCAAGTTTGCAGTCTCCTATCTC
Strongylocentrotus purpuratus clone R3-1003C21, WORKING DRAFT SEQUENCE, 18 unordered pieces.
AC179917.1:115794-115810
GCCGCCCTACAAAAATTTGTGATTGATCAT115794CAATCACAAGTCCTCCAATCAATCGCAAATTTGCAGAATACTTTCTC
Strongylocentrotus purpuratus clone R3-3119N03, WORKING DRAFT SEQUENCE, 21 unordered pieces.
AC180304.1:104932-104948
GTCTTATAAAGAGTTATGATTGATCCAAAT104932CAATCACAAGTCCTCCAATCAATTGCAAGTTTGCAATCTCCTATCTC
Strongylocentrotus purpuratus clone R3-3094O11, WORKING DRAFT SEQUENCE, 21 unordered pieces.
AC180567.1:84521-84537
GTCTTACAAAGAGTTACGGTTGATCCAAAT84521CAATCACAAGTCCTCCAATCAATCACAAGTTTGCAGTCTCCTATCTC
Strongylocentrotus purpuratus clone R3-3025E24, WORKING DRAFT SEQUENCE, 24 unordered pieces.
AC180832.1:8529-8545
ATCTTACAAAGAGTTGCGATTGATCCCACT8529CAATCACAAGTCCTCCAATCAATCACAAGTTTGCAGTCTTCTATCTC
Strongylocentrotus purpuratus clone R3-3068A4, WORKING DRAFT SEQUENCE, 31 unordered pieces.
AC180851.1:25454-25470
GTCTTATAAAGAGTTGCGATTAATCCACGT25454CAATCACAAGTCCTCCATCAGTTATTTTCATTGCAGTCTCTTTTCTC
Strongylocentrotus purpuratus clone R3-3064B18, WORKING DRAFT SEQUENCE, 39 unordered pieces.
AC180924.1:174418-174434
GTCTTACAAAGAGTTACGATTGATCCAAAT174418CAATCACAAGTCCTCCAATCAATCGCAAGTTTGCAAACTCCTATCTC
Strongylocentrotus purpuratus clone R3-3050K5, WORKING DRAFT SEQUENCE, 45 unordered pieces.
AC181050.1:66706-66722
GTCTTTCAAAGAGTTGCGATTGAGCCAAAT66706CAATCACAAGTCCTCCAATCAATCGCAACTTTGCAGTGTCCTACTGT
Strongylocentrotus purpuratus clone R3-4009A14, WORKING DRAFT SEQUENCE, 29 unordered pieces.
AC181220.1:90126-90142
ATCTTACAAAGCATTACGATTGATCCACAT90126CAATCACAAGTCCTCCAATCAATCGCAAGTTTGCAGTCTCCTATCTC
Strongylocentrotus purpuratus clone R3-50J7, WORKING DRAFT SEQUENCE, 28 unordered pieces.
AC181435.1:25531-25547
GTCTTACATAGAGTTACGATTGATCCAAAT25531CAATCACAAGTCCTCCAATCAATCTCAAGTTTGCAGTCTCCTATTTC
Strongylocentrotus purpuratus clone R3-9D17, WORKING DRAFT SEQUENCE, 11 unordered pieces.
AC181575.1:122959-122975
GTCTTATAAAGAGTTGCAGTTGATCCCAAT122959CAATCACAAGTCCTCCAATTAATCAGAAATAAGTTGCTATTAAAGGT
Strongylocentrotus purpuratus clone R3-1008L12, WORKING DRAFT SEQUENCE, 36 unordered pieces.
AC181941.1:18802-18818
GTCTTATAAAGAGTTTCAACTGATCCAAAT18802CAATCACAAGTCCTCCAATCAATCACAAGTTTGCAGTCCCCTATCCC
Strongylocentrotus purpuratus clone R3-4003J3, WORKING DRAFT SEQUENCE, 38 unordered pieces.
AC184461.1:136599-136615
GTCTTATAAAGTATTGTGATTGATCCAAAT136599CAATCACAAGTCCTCCAATCAATGGCAAGTTTGCAGTTTCCTATCTC
Strongylocentrotus purpuratus clone R3-14A10, WORKING DRAFT SEQUENCE, 31 unordered pieces.
AC201126.1:119714-119730
GTCTTACAAAGAGTTGTAATTCATCCAAAT119714CAATCACAAGTCCTCCAATCAATCACAAGTTTGCAGTCTCCTATCTC
Strongylocentrotus purpuratus clone R3-3061G09, WORKING DRAFT SEQUENCE, 15 unordered pieces.
AC201486.1:72717-72733
TACAAAGAGTTACGATTTAGTGATCCAAAT72717CAATCACAAGTCCTCCAATCAATCGCAAGTTTGCAGTCTCCTATCTC
Strongylocentrotus purpuratus clone R3-3089O18, WORKING DRAFT SEQUENCE, 16 unordered pieces.
AC201521.1:31569-31585
TCTTATATAGAGTAGCGATTAGATCCGAAC31569CAATCACAAGTCCTCCAATCAATCACAAGTTTACAGTCTCCTATATC
Strongylocentrotus purpuratus clone R3-42M15, WORKING DRAFT SEQUENCE, 28 unordered pieces.
AC201594.1:140779-140795
TTGATATAAAGACTTGCAATTAATTTGGAT140779CAATCACAAGTCCTCCAATCAACCGCAGTTTGCAGTCTCCTATCTCT
Strongylocentrotus purpuratus clone R3-64P05, WORKING DRAFT SEQUENCE, 36 unordered pieces.
AC201616.1:83442-83458
TTGATATAAAGACTTGCAATTAATTTGGAT83442CAATCACAAGTCCTCCAATCAACCGCAGTTTGCAGTCTCCTATCTCT
Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0047M04, complete sequence.
AC145395.3:32853-32869
TAACTTCTTCACCAATATTCTCTGATCAAC32853CAATCACAAGTCCTCCACCATTCAATTCTTTCATCTACCTCTACTTC
Oryza sativa Japonica Group DNA, chromosome 11, cultivar: Nipponbare, complete sequence.
AP014967.1:27958404-27958420
TAACTTCTTCACCAATATTCTCTGATCAAC27958404CAATCACAAGTCCTCCACCATTCAATTCTTTCATCTACCTCTACTTC
Cordyceps militaris strain ATCC 34164 chromosome IV, complete sequence.
CP023322.1:2065233-2065249
CTAGCCAATCGCACTTCAAGCGCACTCCCC2065233CAATCACAAGTCCTCCACCCATTCTTCAATTTCCCAACTTGCAACCT
Chloropicon primus strain CCMP1205 chromosome 17, complete sequence.
CP031050.1:455738-455754
AGAACGTGAAGGTGACCTCCTGAAGCTGCC455738CAATCACAAGTCCTCCAGTCCCAAGGGCAAGGCGGATCCTGGCTTCG
Chloropicon primus strain RCC138 chromosome 17.
CP060770.1:438334-438350
AGAACGTGAAGGTGACCTCCTGAAGCTGCC438334CAATCACAAGTCCTCCAGTCCCAAGGGCAAGGCGGATCCTGGCTTCG
Aureobasidium melanogenum strain TN3-1 chromosome 19.
CP061998.1:38081-38097
TCCACATAAATCCACCAGAACCTCCTTCGT38081CAATCACAAGTCCTCCAAGCCAGAGTATGCGTATCCTTGACCCCGTC
Oryza sativa Japonica Group cultivar Changxianggeng 1813 chromosome 6.
CP101146.1:28440390-28440406
TAACTTCTTCACCAATATTCTCTGATCAAC28440390CAATCACAAGTCCTCCACCATTCAATTCTTTCATCTACCTCTACTTC
UNVERIFIED_CONTAM: Avena longiglumis isolate 447 chromosome 3.
CP125975.1:242696272-242696288
GCAGGAACTGTAGAGTGCCCGTGACTACTC242696272CAATCACAAGTCCTCCATCATCAAGATGGAGGATCAGACCATCGCCA
Oryza sativa Japonica Group cultivar Nipponbare isolate AGIS-1.0 chromosome 11.
CP132245.1:29920472-29920488
TAACTTCTTCACCAATATTCTCTGATCAAC29920472CAATCACAAGTCCTCCACCATTCAATTCTTTCATCTACCTCTACTTC
Aegilops umbellulata cultivar TA1851 chromosome 2U.
CP136055.1:581442036-581442052
ACAAGACGAAGAGAGGTTTGCTCCTGTGTT581442036CAATCACAAGTCCTCCAACCAGACGTAGTCCTTTGGCATAAGGGCGA
Fragaria x ananassa cultivar Benihoppe chromosome 6.
CP139770.1:18140310-18140326
GGATCACAAACATGAATAACAAAACTCAAA18140310CAATCACAAGTCCTCCAACTCAAACAAAAGCTATTCAAGCCCCATAT
Fragaria x ananassa cultivar Benihoppe chromosome 5.
CP139771.1:17837846-17837862
GGATCAAAAACATGAATAACAAAACTCAAA17837846CAATCACAAGTCCTCCAACTCAAACAAAAGCTATTCAAGCCCCATAT
Leptosphaeria biglobosa brassicae b35_scaffold00022 complete sequence.
FO905642.1:512021-512037
CGCGGAGTCGAGACTAGTAGCAAGGCACGA512021CAATCACAAGTCCTCCAAGAAAAACGAGTTTTTCAGAAGCTATTGCT
Citrus reshni microsatellite DNA locus mCrCIR02H05.
HE801214.1:415-431
TACTCATTGTTGCAACCTTGGCATGCAAAT415CAATCACAAGTCCTCCACCTCCCAGAAAGCTACGGGCTGCCTTCATC
Triticum aestivum genome assembly, chromosome: 5B.
LR862542.1:520926491-520926507
CCCGCTGTTCCTAATGGCCTGACGCACGGT520926491CAATCACAAGTCCTCCAACGGGTGGAGCTGGTTCAGGTACCACGGGC
Triticum aestivum genome assembly, chromosome: 5B.
LR865471.1:509706706-509706722
CCCGCTGTTCCTAATGGCCTGACGCACGGT509706706CAATCACAAGTCCTCCAACGGGTGGAGCTGGTTCAGGTACCACGGGC
Triticum aestivum genome assembly, chromosome: 5B.
LR877322.1:524961936-524961952
CCCGCTGTTCCTAATGGCCTGACGCACGGT524961936CAATCACAAGTCCTCCAACGGGTGGAGCTGGTTCAGGTACCACGGGC
Triticum aestivum genome assembly, chromosome: 5B.
LR878448.1:526968657-526968673
CCCGCTGTTCCTAATGGCCTGACGCACGGT526968657CAATCACAAGTCCTCCAACGGGTGGAGCTGGTTCAGGTACCACGGGC
Triticum aestivum genome assembly, chromosome: 5B.
LS992093.1:523139154-523139170
CCCGCTGTTCCTAATGGCCTGACGCACGGT523139154CAATCACAAGTCCTCCAACGGGTGGAGCTGGTTCAGGTACCACGGGC
Triticum turgidum subsp. durum genome assembly, chromosome: 5B.
LT934120.1:520550043-520550059
CCCGCTGTTCCTAATGGCCTGACGCACGGT520550043CAATCACAAGTCCTCCAACGGGTGGAGCTGGTTCAGGTACCACGGGC
Avena insularis genome assembly, chromosome: 5D.
OU342349.1:297995610-297995626
GAAGGAGTTGGATAATGCTCGTTCCTACGC297995610CAATCACAAGTCCTCCATCGCCGCCCAGAAGGATCAGACTATTTCCA
Avena insularis genome assembly, chromosome: 5D.
OU342349.1:300500613-300500629
GAAGGAGTTGGATAATGCTCGTTCCTACGC300500613CAATCACAAGTCCTCCATCGTCGCCCAGAAGGATCAGACTATTTCCA
Avena sativa genome assembly, chromosome: 4A.
OU342381.1:182325165-182325181
GCAGGAGTTGGATAATTGCCGTGACTACTC182325165CAATCACAAGTCCTCCATCATCAAGACAAAGGATCAGACCATCGCCA
Avena sativa genome assembly, chromosome: 7A.
OU342384.1:474325782-474325798
GCAGGAACTGGACAATGCCCGTGACTACTC474325782CAATCACAAGTCCTCCATCATCAAGACGAAGGATCATACCATCGCCA
Avena atlantica genome assembly, chromosome: 2A.
OU342734.1:118107491-118107507
GTAGGAATTGGACAATTGCCGTGACTACTC118107491CAATCACAAGTCCTCCATCATCAAGACGAAGGATCAGACCATCGCCA
Avena atlantica genome assembly, chromosome: 4A.
OU342736.1:97250105-97250121
GCAAGAATTGGAAAATTGCCATGACTACTC97250105CAATCACAAGTCCTCCATCATCAAAACGAAGGATCCGACCATCACCA
Avena atlantica genome assembly, chromosome: 5A.
OU342737.1:424007489-424007505
GAAGGAGTTGGATAATGCTCGTTCCTACGC424007489CAATCACAAGTCCTCCATCGCCGCCCAGAAGGATCAGACTATTTCCA
Avena longiglumis genome assembly, chromosome: 7A.
OU342753.1:505682852-505682868
ACAAGAACTGGACAATGCCCGTGACTACTC505682852CAATCACAAGTCCTCCATCATCAGGACGAAGGATCAGACCATCGCCA
Triticum aestivum genome assembly, chromosome: 5B.
OU343180.1:542601608-542601624
CCCGCTGTTCCTAATGGCCTGACGCACGGT542601608CAATCACAAGTCCTCCAACGGGTGGAGCTGGTTCAGGTACCACGGGC
Avena sativa genome assembly, chromosome: 4.
OV702282.1:174790141-174790157
GCAGGAGTTGGATAATTGCCGTGACTACTC174790141CAATCACAAGTCCTCCATCATCAAGACAAAGGATCAGACCATCGCCA
Avena sativa genome assembly, chromosome: 7.
OV702285.1:478850177-478850193
GCAGGAACTGGACAATGCCCGTGACTACTC478850177CAATCACAAGTCCTCCATCATCAAGACGAAGGATCATACCATCGCCA
Aegilops speltoides subsp. speltoides genome assembly, chromosome: 5B.
OX082601.1:467180491-467180507
CCCGCTGTTCCTAATGGCCTGACACACGGT467180491CAATCACAAGTCCTCCAACGGGTGGAGCTGGTTCAGGTACCACGGGC
Sambucus nigra genome assembly, chromosome: 5.
OX422211.1:459736430-459736446
ACGACTAACCCGAATTGCCACCCCTAACCA459736430CAATCACAAGTCCTCCACGCTAGTTAAACTTTGCCCATAAGCTCCAA
Vicia faba genome assembly, chromosome: 4.
OX451739.1:152822516-152822532
TAGCAAGACATGTGATCTTATACTTATGAG152822516CAATCACAAGTCCTCCAACCCTTTGCTCTATATAAAGCCATCATTTT
Arachnomyces peruvianus genome assembly, chromosome: 3.
OX453234.1:5037194-5037210
ACGAACAGAATGCCGGCACACCAGCTGCGC5037194CAATCACAAGTCCTCCAGTATCCCATAGTTCAACGACTACAGTCCCA
Bromus sterilis genome assembly, chromosome: 3.
OX465597.1:240601779-240601795
TAGGACGGAGAGAGTTTTGCTCCAGGTGTT240601779CAATCACAAGTCCTCCAACCAGACGTAGCGTTTGCAGAGCGTGAACT
Theobroma cacao genome assembly, chromosome: 6.
OY284463.1:3897864-3897880
CAATGACTATAAAAAATAAGTCTTTGTTTA3897864CAATCACAAGTCCTCCACACCCTTGACTTCTGTATTTTTGTCACGTT
Sphenostylis stenocarpa genome assembly, chromosome: 4.
OY731401.1:54285610-54285626
CACAATAGGAATAAAAGTCAAGATCTCTTA54285610CAATCACAAGTCCTCCAACTCCACCTGCATGACCAACCTCGTCTTTG
Entoloma clypeatum genome assembly, chromosome: 8.
OY751492.1:3725790-3725806
TAACACCTTTCCCCGACATTTCTTTCCCAA3725790CAATCACAAGTCCTCCAGCCCTCGCTGCCCTGGCGCCCACCCCTCAA
Citrus sinensis genome assembly, chromosome: 3.
OY754320.1:512633-512649
TACTCATTGTTGCAACCTTGGCATGCAAAT512633CAATCACAAGTCCTCCACCTCTCAGAAAGCTACGGGCTGCCTTCATC
Euphorbia lathyris genome assembly, chromosome: 4.
OY755223.1:56835177-56835193
TGTCTACACAACTTATTCCTAAAGGTTTAT56835177CAATCACAAGTCCTCCATTATTTGTAGGAACAAATTATACATTTTGG
Euonymus europaeus genome assembly, chromosome: 10.
OY756966.1:4820111-4820127
GAGGAGTTCAAACTTACAGTCAAGGATCCT4820111CAATCACAAGTCCTCCAATTACATGTCTACGATTGGGAAAAGGTTCG
Galeopsis tetrahit genome assembly, chromosome: 5.
OY776123.1:14765329-14765345
ACCAGATTGTAATATCAGAAAATCCGCTTG14765329CAATCACAAGTCCTCCATAGATAACCTCCATGAGCCAATTGAAGAAT
Lepidium didymum genome assembly, chromosome: 9.
OY986981.1:19201211-19201227
GAACACTTCAAACTCATCGTGAAGGATCCA19201211CAATCACAAGTCCTCCAACTAGAAGTCTTTGACTGGGACAAGGTCTC
Persicaria maculosa genome assembly, chromosome: 6.
OY998256.1:43542970-43542986
ATTTATGAAAACCTAAACATAGTAATTGTA43542970CAATCACAAGTCCTCCAATGGTTTCCGAAAATCCTCACAACAAACCA
Cytobacillus suaedae strain HD4P25 chromosome, complete genome.
CP063163.1:1087745-1087761
TTTCCCAGTCAATTGAACATTCTTTAAATG1087745CAATCACAAGTCCTCCAACTTGATCATAAGCACTAAGTGCATCTGAA
Samia ricini White DNA, chromosome 14, sequence.
AP028170.1:4946891-4946907
GACTTCGCTATCCCATATATTGATTGCATT4946891CAATCACAAGTCCTCCACTGTTGTCCACAAGTCGTCCTGTCCAGTCC
Xylota sylvarum genome assembly, chromosome: 2.
LR999958.1:123205327-123205343
ACTTTTTCGCCTTTGTCGAGTTTGGGTAAT123205327CAATCACAAGTCCTCCAAAGAACCCGGCCTTCATGGCCTGCTCCGTA
Carcina quercana genome assembly, chromosome: 12.
OU342438.1:14242318-14242334
CTTTCACATCCAGGAGGAGTTCCCACATCA14242318CAATCACAAGTCCTCCAGGACACACTAAGACGAAGGTATAGTGTCAT
Platycnemis pennipes genome assembly, chromosome: 4.
OW121850.1:100927116-100927132
AATACTTCTTCCGTTCATCGCGAACACATC100927116CAATCACAAGTCCTCCACCCTCCAAACCTAGATTTCTGAACCGCACA
Gibbula magus genome assembly, chromosome: 1.
OW388289.1:54440289-54440305
CTGTACTTGTGTGTTCTGACATAAGTAAGC54440289CAATCACAAGTCCTCCAATAAAAGCTTTCTATGCGAGAACATAGGGG
Gibbula magus genome assembly, chromosome: 4.
OW388292.1:46537504-46537520
CTCACATGTTATGAAACAAATTTATTTAGC46537504CAATCACAAGTCCTCCAACATAAGCTGTTTGTGCAAGAAGCTAGGGC
Gibbula magus genome assembly, chromosome: 4.
OW388292.1:46837740-46837756
TCTGAGTGTACTGACACAAGCTCAGTTAGC46837740CAATCACAAGTCCTCCAACAAAAGCTGTTGGTGTAACAAGCTAGGGG
Gibbula magus genome assembly, chromosome: 6.
OW388294.1:56025270-56025286
CTTGCATGTTCTAACACAAGTTCAGTTAGC56025270CAATCACAAGTCCTCCAACAAAAGCTTTCAGTGCGAGAAGTTAGTGG
Gibbula magus genome assembly, chromosome: 11.
OW388299.1:36679489-36679505
ACTTATATGTTCTGACGCAATTATGTTAAC36679489CAATCACAAGTCCTCCAACAATAGCTTTCGATGCGAGAATCTAGGGG
Gibbula magus genome assembly, chromosome: 12.
OW388300.1:30940167-30940183
GTTTGCATGTTCTGACGCAATTCAGTTAAC30940167CAATCACAAGTCCTCCACCAAAAGCTACATGTTGGGGCAGATAACTC
Gibbula magus genome assembly, chromosome: 14.
OW388302.1:8007071-8007087
CTCTAATTTTCTGACACAAATTTAGTTAAC8007071CAATCACAAGTCCTCCAACAAAAGATAATGGTGTGATACGTAATCAT
Gibbula magus genome assembly, chromosome: 14.
OW388302.1:8013844-8013860
CTCTAATTTTCTGACACAAATTTAGTTAAC8013844CAATCACAAGTCCTCCAACAAAAGATAATGGTGTGATACGTAATCAT
Gibbula magus genome assembly, chromosome: 14.
OW388302.1:8019763-8019779
CTCGAATTTTCTGACACAAATTTAGTTAAC8019763CAATCACAAGTCCTCCAACAAAAGATAATGGTGTGATACGTAATCAT
Gibbula magus genome assembly, chromosome: 14.
OW388302.1:8630478-8630494
CTCGAATTTTCTGACACAAATTTAGTTAAC8630478CAATCACAAGTCCTCCAACAAAAGATAATGGTGTGATACGTAATCAT
Gibbula magus genome assembly, chromosome: 16.
OW388304.1:14573454-14573470
GCTTGCATGTTCTGACGCAATTCAGTTAAC14573454CAATCACAAGTCCTCCAACAAAAGCTTTCGGTCCGAAAAACTAGGGG
Anopheles bellator genome assembly, chromosome: 2.
OX030928.2:55309239-55309255
TATCAGCGCCAGCATGTCACTACGAGCCCA55309239CAATCACAAGTCCTCCAATCAGCGGCCCATCAACGGACTGGAGCCAA
Dicycla oo genome assembly, chromosome: 23.
OX411732.1:12572725-12572741
ACATTCCGCCACCAGAACTGGCACCACCAC12572725CAATCACAAGTCCTCCACCAGAACTGGCACCACCACCTATCACAACG
Diaphora mendica genome assembly, chromosome: 9.
OX421319.1:15878250-15878266
TCAATACATAGCTATGTAAACTGGATAGAA15878250CAATCACAAGTCCTCCACCCCATCTGTCTGTCTGTTCGCAATAAACC
Beris chalybata genome assembly, chromosome: 4.
OX421897.1:64727774-64727790
CAGGCATTCAATTAGAACAAACTTTTAAAC64727774CAATCACAAGTCCTCCAATGAACTAGTTAAAAGAACTAAGCTTGCTC
Amphiduros pacificus genome assembly, chromosome: 3.
OX439002.1:4474875-4474891
CAGCACACGGTTCAACCACACTTCAACCTG4474875CAATCACAAGTCCTCCATCAAGCAAACAGTGCAGAACAACAACAGCA
Argyresthia goedartella genome assembly, chromosome: 12.
OX463818.1:3846338-3846354
CAGACACTCACGAAAATCCACTGTAACACG3846338CAATCACAAGTCCTCCAGTTCCAGACGCGTAAAACGGCAGACCGAAA
Agrotis exclamationis genome assembly, chromosome: 8.
OX465424.1:6819780-6819796
GGACATCGAAAAAATATCTAGATAATATCT6819780CAATCACAAGTCCTCCACCAACATGGAAGAAACGTTGTTTCACCATA
Octopus vulgaris genome assembly, chromosome: 4.
OX597817.1:6626180-6626196
GGAAAGTCATGAATATTTAAATAGTAGGCT6626180CAATCACAAGTCCTCCAAATGTTGAAGTATTTTTCTGGGACGGAATA
Agrotis clavis genome assembly, chromosome: 7.
OX940924.1:7234780-7234796
GGACATCGAAAAAATATCTAGATGATATCT7234780CAATCACAAGTCCTCCAGCAACATGGAAGCAACGTAGTTTCACCATA
Tolmerus cingulatus genome assembly, chromosome: 3.
OY390710.1:9394634-9394650
AATTGCGGAGGACCCCTCGCTCCGATCTCG9394634CAATCACAAGTCCTCCAGGGACAACTCTGAGACGGGGGTGTCGGTAG
Sepia lycidas genome assembly, chromosome: 11.
OZ010581.1:3660358-3660374
AAATGCAATATATTTGAAAGAATCACTTGA3660358CAATCACAAGTCCTCCAAGAAAATAGGAATATAAGCAGATTGTAGCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAATCACAAGTCCTCCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAATCACAAGTCCTCCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.423 | 0.413 | search_plus_done; http://172.18.8.135:50400/match?q=CAATCACAAGTCCTCCA&k=0&no_gap=0&offset=0&limit=50
0.554 | 0.132 | search_minus_done; http://172.18.8.135:50400/match?q=TGGAGGACTTGTGATTG&k=0&no_gap=0&offset=0&limit=0
0.554 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).