GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-18 00:44:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Elaeis guineensis EST, clone (6lib)_isotig27303.
LM620165.1:1198-1217
ACTTTCCAGAGCGGCCGGGGATCCCCCGTG1198CAATCAGGCTCCAGTTCCTCGCCCCAAACTTGTTCACGAGATTGCTCAGT
Alisma plantago-aquatica genome assembly, chromosome: 5.
OY856413.1:920489640-920489659
ATTTCCCAGAGCGTCCAGCTATTCCACGGG920489640CAATCAGGCTCCAGTTCCTCGGCCCGAACTTGGCCACTAGCTTGCTGAGT
EG-A11_010_D12 Oil palm abnormal apex Lambda Zap Library Elaeis guineensis cDNA, mRNA sequence.
CN600371.1:346-365
ACTGAGCAATCTCGTGAACAAGTTTGGGGC346GAGGAACTGGAGCCTGATTGCACGGGGGATCCCCGGCCGCTCTGGAAAGT
TSA: Cyclocybe aegerita AA_4872, mRNA sequence.
JW842461.1:320-339
CTAGTTTTGGTGTCTTTTTTTTTCCTTGGA320GAGGAACTGGAGCCTGATTGAAACCTCCAGTGTTCCGAGAAATGGGAATC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAATCAGGCTCCAGTTCCTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAATCAGGCTCCAGTTCCTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.194 | 0.185 | search_plus_done; http://172.18.8.135:50400/match?q=CAATCAGGCTCCAGTTCCTC&k=0&no_gap=0&offset=0&limit=50
0.255 | 0.061 | search_minus_done; http://172.18.8.135:50400/match?q=GAGGAACTGGAGCCTGATTG&k=0&no_gap=0&offset=0&limit=48
0.256 | 0.001 | cgi_end;

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