GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-12 13:52:09, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Gossypium hirsutum clone BAC Chr11_9_UCR49 sequence, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces.
MW008617.1:39894-39915
TGACTGAAAATTTATTATCAAAGTTAACTC39894CACAACATTCTCAACATGGAGAATCGTTTCGCAGGCTAGCTCCACCACTTTC
M.truncatula DNA sequence from clone MTH2-139F11 on chromosome 3.
CU019603.9:94991-95012
AGTTATTGAGGATTTAATACCATGAAAGTG94991CACAACATTCTCAACATGGAGATTATAACTTGTGCAGCTGGAGAACGAGAAC
Medicago truncatula clone mth2-175a2, WORKING DRAFT SEQUENCE, 80 unordered pieces.
AC231349.10:519229-519250
GTTCTCGTTCTCCAGCTGCACAAGTTATAA519229TCTCCATGTTGAGAATGTTGTGCACTTTCATGGTATTAAATCCTCAATAACT
Gossypium hirsutum cultivar TM1 chromosome A11.
CP023743.1:60846523-60846544
GAAAGTGGTGGAGCTAGCCTGCGAAACGAT60846523TCTCCATGTTGAGAATGTTGTGGAGTTAACTTTGATAATAAATTTTCAGTCA
Gossypium herbaceum isolate GPA1alz chromosome 11.
CP106704.1:125293961-125293982
GAAAGTGGTGGAGCTAGCCTGCGAAACGAT125293961TCTCCATGTTGAGAATGTTGTGGAGTTAACTTTGATAATAAATTTTCAGTCA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CACAACATTCTCAACATGGAGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CACAACATTCTCAACATGGAGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.112 | 0.103 | search_plus_done; http://172.18.8.135:50400/match?q=CACAACATTCTCAACATGGAGA&k=0&no_gap=0&offset=0&limit=50
0.132 | 0.020 | search_minus_done; http://172.18.8.135:50400/match?q=TCTCCATGTTGAGAATGTTGTG&k=0&no_gap=0&offset=0&limit=48
0.134 | 0.002 | cgi_end;

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