GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 04:31:23, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Pig DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH242-392I14.
CU019588.2:107006-107025
CTTGTTCAGTGGGTGAAGGATGTGAATTGC107006CACAAGCTTCAGTGGAAGTCGCAGATGCAGCTCAGATCCCTTGTTACCGT
Lotus japonicus genomic DNA, chromosome 3, clone: LjB14E23, BM1673.
AP010403.1:38759-38778
AACTTGATATATGAGTTGGTACTTAAATCT38759CACAAGCTTCAGTGGAAGTCTCATCATCACAATTCATATTTTTCTCTCTC
Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:4744160-4744179
AACTTGATATATGAGTTGGTACTTAAATCT4744160CACAAGCTTCAGTGGAAGTCTCATCATCACAATTCATATTTTTCTCTCTC
Sus scrofa scrofa breed NS chromosome 11.
CP071562.1:62467922-62467941
ACGGTAACAAGGGATCTGAGCTGCATCTGC62467922GACTTCCACTGAAGCTTGTGGCAATTCACATCCTTCACCCACTGAACAAG
Sus scrofa genome assembly, chromosome: 11.
OY997218.1:64271632-64271651
ACGGTAACAAGGGATCTGAGCTGCATCTGC64271632GACTTCCACTGAAGCTTGTGGCAATTCACATCCTTCACCCACTGAACAAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CACAAGCTTCAGTGGAAGTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CACAAGCTTCAGTGGAAGTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.118 | 0.109 | search_plus_done; http://172.18.8.135:50400/match?q=CACAAGCTTCAGTGGAAGTC&k=0&no_gap=0&offset=0&limit=50
0.147 | 0.029 | search_minus_done; http://172.18.8.135:50400/match?q=GACTTCCACTGAAGCTTGTG&k=0&no_gap=0&offset=0&limit=47
0.148 | 0.001 | cgi_end;

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