GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-17 16:43:09, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

RS2AL39TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
EW724046.1:696-717
CTAATACCCGTCGTTGAGCAACAATCCGTG696CACATACCACAGAACAACCGCTCCAGGGAACCTAGAACAAAGGTTTCAAGAG
RS2AL39JQ RS2(RS) Raphanus sativus cDNA 3', mRNA sequence.
EW728524.1:470-491
CTCTTGAAACCTTTGTTCTAGGTTCCCTGG470AGCGGTTGTTCTGTGGTATGTGCACGGATTGTTGCTCAACGACGGTATTAGG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CACATACCACAGAACAACCGCT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CACATACCACAGAACAACCGCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.169 | 0.160 | search_plus_done; http://172.18.8.135:50400/match?q=CACATACCACAGAACAACCGCT&k=0&no_gap=0&offset=0&limit=50
0.259 | 0.090 | search_minus_done; http://172.18.8.135:50400/match?q=AGCGGTTGTTCTGTGGTATGTG&k=0&no_gap=0&offset=0&limit=49
0.259 | 0.001 | cgi_end;

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