GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-01 20:05:29, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Vigna angularis mRNA, clone: VES09K14.
HX945731.1:100-119
CATCCGAGGAACAAGCTTTCCGCAGTTGAA100CACCCTTTCGTCCACTCAATCACCCATGGCTCGCTCTTTCACTAACGTTA
Vigna angularis mRNA, clone: VES18B14.
HX948911.1:100-119
CATCCGAGGAACAAGCTTTCCGCAGTTGAA100CACCCTTTCGTCCACTCAATCACCCATGGCTCGCTCTTTCACTAACGTTA
Vigna angularis mRNA, clone: VES19C05.
HX949301.1:83-102
CATCCGAGGAACAAGCTTTCCGCAGTTGAA83CACCCTTTCGTCCACTCAATCACCCATGGCTCGCTCTTTCACTAACGTTA
Vigna angularis mRNA, clone: VES21A10.
HX950007.1:100-119
CATCCGAGGAACAAGCTTTCCGCAGTTGAA100CACCCTTTCGTCCACTCAATCACCCATGGCTCGCTCTTTCACTAACGTTA
Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
AP015041.1:25002384-25002403
CATCCGAGGAACAAGCTTTCCGCAGTTGAA25002384CACCCTTTCGTCCACTCAATCACCCATGGCTCGCTCTTTCACTAACGTTA
Vigna angularis mRNA, clone: VES08J19.
HX945329.1:535-554
TAACGTTAGTGAAAGAGCGAGCCATGGGTG535ATTGAGTGGACGAAAGGGTGTTCAACTGCGGAAAGCTTGTTCCTCGGATG
Vigna angularis mRNA, clone: VES16A19.
HX948139.1:535-554
TAACGTTAGTGAAAGAGCGAGCCATGGGTG535ATTGAGTGGACGAAAGGGTGTTCAACTGCGGAAAGCTTGTTCCTCGGATG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CACCCTTTCGTCCACTCAAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CACCCTTTCGTCCACTCAAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.426 | 0.417 | search_plus_done; http://172.18.8.135:50400/match?q=CACCCTTTCGTCCACTCAAT&k=0&no_gap=0&offset=0&limit=50
0.643 | 0.217 | search_minus_done; http://172.18.8.135:50400/match?q=ATTGAGTGGACGAAAGGGTG&k=0&no_gap=0&offset=0&limit=45
0.644 | 0.001 | cgi_end;

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