GGGenome | Results

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2025-04-11 03:47:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Porphyra yezoensis cDNA, clone:PFL100g03_r, 5'end.
AU197168.1:112-131

CTGGTGCGCAGTTTTTTCTTCATCGCTGCC112CACCTGTTGCCTAACCAAGGCGGTGCCGACGGTGCGTACGCGGCGGGGGC

Porphyra yezoensis cDNA clone:PM062e10_r, 5' end.
AV435801.1:219-238

CTGGTGCGCAGTTTTTTCTTCATCGCTGCC219CACCTGTTGCCTAACCAAGGCGGTGCCGACGGTGCGTACGCGGCGGGGGC

Sepioteuthis lessoniana genome assembly, chromosome: 14.
OY757917.1:3758212-3758231

CGCCTAAGGAGGGCAGACTAAGTTTTTTAG3758212CCTTGGTTAGGCAACAGGTGTAGATGAGGGAAAACTGAATTAAAACCAGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.163 | 0.155 | search_plus_done; http://172.18.8.135:50400/match?q=CACCTGTTGCCTAACCAAGG&k=0&no_gap=0&offset=0&limit=50
0.187 | 0.024 | search_minus_done; http://172.18.8.135:50400/match?q=CCTTGGTTAGGCAACAGGTG&k=0&no_gap=0&offset=0&limit=48
0.188 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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