GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 17:04:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Populus nigra genome assembly, chromosome: 15.
OX637686.1:2892571-2892590
ACCAGAGAGAGAGAGAGAGAGAGAGAGAAA2892571CACTATTCCAGTGAATATAGTTTTTTGGGGTACAATAAAATTCCCTCCTC
Hordeum bulbosum genome assembly, chromosome: 2H_1.
OY737490.1:523319334-523319353
ATGCAATATTATTTTGCATGACCTTGAATC523319334CACTATTCCAGTGAATATAGTTTTCAGCTTGAATCCTCTCTATCCCAATA
Thioploca ingrica DNA, complete genome.
AP014633.1:1015009-1015028
CTTTGCTTTTAGCACTGCCAGTAGTAATGC1015009CACTATTCCAGTGAATATAGAAAATACCGAAAAACATTTAGGTGTAGATA
Esperia sulphurella genome assembly, chromosome: 6.
OX352263.1:11172533-11172552
AAATAACTGAATAATGAGGTTATCATCATA11172533CACTATTCCAGTGAATATAGAATATAACGTACATATACGTCGGTGGACCT
Chalcosyrphus nemorum genome assembly, chromosome: 1.
OX454332.1:14656652-14656671
ATTCCTTGCGTGTGTTATGGGTGCAGTATG14656652CACTATTCCAGTGAATATAGTGATAGAGAATATCGCTGTGGTCTGGGGTC
Pipistrellus pipistrellus genome assembly, chromosome: 7.
LR862363.1:71783108-71783127
ACACTTGTTCTCCCCTCCTCTTCAACTCCC71783108CTATATTCACTGGAATAGTGGGGTTCAGATTGGGGAGCAGAAGAACTGTA
Avena insularis genome assembly, chromosome: 5D.
OU342349.1:401921207-401921226
AGTGGGGACTAAAATAATATATATCGTAAA401921207CTATATTCACTGGAATAGTGAAGAAAACGAATTGATAGTCGGTTATCAAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CACTATTCCAGTGAATATAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CACTATTCCAGTGAATATAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.102 | 0.093 | search_plus_done; http://172.18.8.135:50400/match?q=CACTATTCCAGTGAATATAG&k=0&no_gap=0&offset=0&limit=50
0.131 | 0.029 | search_minus_done; http://172.18.8.135:50400/match?q=CTATATTCACTGGAATAGTG&k=0&no_gap=0&offset=0&limit=45
0.132 | 0.001 | cgi_end;

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