GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-10 20:35:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Melanotus villosus genome assembly, chromosome: 3.
OY720420.1:73382157-73382175
AGAATTTTTCTTTTTCTTCTTCTTGTCTAG73382157CACTGATGGGAGCATATGCTTGGATAATGTTTAATTTGGTTGCTTATCT
Dioctria rufipes genome assembly, chromosome: 2.
OZ002741.1:40075568-40075586
CAAAATGCCACTAAATTGGGAAGTTTTGCC40075568CACTGATGGGAGCATATGCTGGCTACAGAAGCTAAAGGGCTAACCACAA
Felis catus Senzu DNA, chromosome: B1, American Shorthair breed.
AP023155.1:200382229-200382247
CGCCGTGCCTGGAACAGTGCCGGGGCCCCG200382229GCATATGCTCCCATCAGTGCCTGCCGAATGAATGACAGAGCCTTCCCCA
C34109D01EF PostHarvP1 Citrus clementina cDNA clone C34109D01, mRNA sequence.
FC930816.1:15-33
GATAGGCTATTGAT15GCATATGCTCCCATCAGTGACAATGCTGGAGGCATTGCTGAGATGGCAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CACTGATGGGAGCATATGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CACTGATGGGAGCATATGC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.089 | 0.081 | search_plus_done; http://172.18.8.135:50400/match?q=CACTGATGGGAGCATATGC&k=0&no_gap=0&offset=0&limit=50
0.161 | 0.072 | search_minus_done; http://172.18.8.135:50400/match?q=GCATATGCTCCCATCAGTG&k=0&no_gap=0&offset=0&limit=48
0.163 | 0.002 | cgi_end;

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