GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 08:40:48, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Cyprinus carpio genome assembly, scaffold: LG14, chromosome: 14.
LN590704.1:7521969-7521987
GAGACTTCTGCTTGGTTTTATTGTTCTTTC7521969CACTGCTGCCAAGCAAAATCAAACTATAATATTTGTGATACTCTGGTCT
Geotrypetes seraphini genome assembly, chromosome: 7.
LR699152.1:51781394-51781412
GAAATGAAGTTAGTTTTGAAATGGCCTCAA51781394CACTGCTGCCAAGCAAAATATAAAGACAAAAGGTGAAAATGCAATTTGG
Erithacus rubecula genome assembly, chromosome: 15.
LR812118.1:17979553-17979571
GCACTGGGGAAGGGCAAACCACAGAGTCTA17979553CACTGCTGCCAAGCAAAATGTCATTAAGGTTTTAGCAATGCAACACAAA
MAG: archaeon GW2011_AR10 chromosome, complete genome.
CP010424.1:816689-816707
AGGAATGGACCTCCACTTTTCCGGTTTGCT816689CACTGCTGCCAAGCAAAATATAGGAAAATGCTCTGAAAAGAATTTGGCG
Arachis hypogaea cultivar Shitouqi chromosome A05.
CP030987.1:10798681-10798699
AGTCACACTCTCACGCGCTATAGGGCAGTG10798681CACTGCTGCCAAGCAAAATCAATTCTCTTCCTCCTTTGTCTCTTTGTTA
Arachis hypogaea cultivar Shitouqi chromosome B05.
CP030997.1:7023782-7023800
AGTCACACTCTCACGCGCTATAGGGCAGTG7023782CACTGCTGCCAAGCAAAATCAATTCTCTTCCTCCTTTGTCTCTTTGTTA
Arachis ipaensis cultivar K30076 chromosome 05.
CP049896.1:13257308-13257326
AGTCACACTCTCACGCGCTATAGGGCAGTG13257308CACTGCTGCCAAGCAAAATCAATTCTCTTTCTCCTTTGTCTCTTTGTTA
Thelaira solivaga genome assembly, chromosome: 2.
OX377611.1:53460591-53460609
TGGTAAAATATTGCAAAGGTTTTTCCACAG53460591CACTGCTGCCAAGCAAAATGGGCTAATATTGAAACATCAAAACAAAATC
Bimastos eiseni genome assembly, chromosome: 12.
OY365817.1:6067561-6067579
TCATGACTTTCTTGTTTCCTAGTCTTGGAC6067561CACTGCTGCCAAGCAAAATGCTTATGCTTCTGTTGGTCCTTTACTCTGG
Aspidapion aeneum genome assembly, chromosome: 9.
OY755046.1:13544429-13544447
TATATATATATATATATATATATATATATA13544429CACTGCTGCCAAGCAAAATAAAAAAAGTGATTTAAACAACAACTATTAT
Microcaecilia unicolor genome assembly, chromosome: 5.
LR594636.1:127896739-127896757
TGTGATTCATCTCAAATTATGATTCTTTTT127896739ATTTTGCTTGGCAGCAGTGACCTAAATTAAAAATGCCATTTTTTCATCT
Labrus bergylta genome assembly, chromosome: 6.
OZ005714.1:28514367-28514385
TCGTTTTGTGTTTTCTGGGTCTCCTGGACA28514367ATTTTGCTTGGCAGCAGTGGTTTAGTTAATCATTTTCAGTGCATTATTT
Uncultured archaeon clone gwc2_scaffold_150 genomic sequence.
KP308556.1:62998-63016
CGCCAAATTCTTTTCAGAGCATTTTCCTAT62998ATTTTGCTTGGCAGCAGTGAGCAAACCGGAAAAGTGGAGGTCCATTCCT
Arachis hypogaea DNA, clone: 8iHA03O11, cultivar: YI-0311.
DE998522.1:373-391
TAACAAAGAGACAAAGGAGAAAGAGAATTG373ATTTTGCTTGGCAGCAGTGCACTGCCCTATAGCGCGTGAGAGTGTGACT
Hermetia illucens genome assembly, chromosome: 1.
LR899009.1:113250877-113250895
GCTTCCGTTCCTGTACTATACTGTGTTTGA113250877ATTTTGCTTGGCAGCAGTGAAATGCTGACTGCAATAGACCACTATCTAT
Periphyllus acericola genome assembly, chromosome: X.
OX454264.1:28398586-28398604
TAATGTCACTATGATTTTAATGATAATCTC28398586ATTTTGCTTGGCAGCAGTGTTGTTGTTATAATTATTATAAATATAAATA
Falcaria lacertinaria genome assembly, chromosome: 5.
OX602113.1:7702607-7702625
ATATTAAAGATGCTTTGTTCTACTACAGGT7702607ATTTTGCTTGGCAGCAGTGGTATGCGCAGTGTCCGCGCAGTACGGACAC
Tipula confusa genome assembly, chromosome: 3.
OY744477.1:177606218-177606236
CTAGCATCCTTTGTAATTAGTATCGGGAAA177606218ATTTTGCTTGGCAGCAGTGAAATTGTTTTTTTTTTAAATCTGTGATAAT
Diplosoma virens genome assembly, chromosome: 4.
OY796883.1:30736679-30736697
CGTCAATAAATCACAACTACCAACAAAACA30736679ATTTTGCTTGGCAGCAGTGAAGAGAAGCAGCTCTTTTAGGGACGAAGCT
Toxonevra muliebris genome assembly, chromosome: 2.
OY829327.1:53154669-53154687
CCAAACGATGGATGAGGCGCATTGGAGTAA53154669ATTTTGCTTGGCAGCAGTGACGTTCTCCCTCGAGCTGTTGATTTTCTGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CACTGCTGCCAAGCAAAAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CACTGCTGCCAAGCAAAAT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.115 | 0.107 | search_plus_done; http://172.18.8.135:50400/match?q=CACTGCTGCCAAGCAAAAT&k=0&no_gap=0&offset=0&limit=50
0.182 | 0.067 | search_minus_done; http://172.18.8.135:50400/match?q=ATTTTGCTTGGCAGCAGTG&k=0&no_gap=0&offset=0&limit=40
0.189 | 0.006 | cgi_end;

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