GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-20 13:32:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Antiaris toxicaria isolate JCLG002 chromosome 2.
CP141154.1:104946996-104947015
AACCATCCAACACTGAGCCTTCGGAGCCTT104946996CACTTGTTGAGTGACTTTGCTATCCTTTTTTACCAATGCCTTCGTAGTAG
Vibrio coralliilyticus strain RE98 plasmid p380, complete sequence.
CP009619.1:172113-172132
ACCTGCGGTTATTTGGAAGGTAAATCTCTT172113CACTTGTTGAGTGACTTTGCAGTGATGAAAAGCACCTCTCCATTGCTGTA
Agarivorans gilvus strain WH0801, complete genome.
CP013021.1:637494-637513
GACATTCAGCAAATCAAGAGCTTGCGCCGC637494CACTTGTTGAGTGACTTTGCCATCGAACTTAACGTCAGCGTAATCACGCA
Coleophora flavipennella genome assembly, chromosome: 35.
OX369287.1:11670027-11670046
TTTCATCTTGTCCATGTTAATTTTAAGACC11670027CACTTGTTGAGTGACTTTGCTAAGACCATCGAGCATTGTGCTTAGGTCTT
Agonopterix heracliana genome assembly, chromosome: 15.
OY856322.1:9156205-9156224
CGGCGGTGCAGTTGCGACATGCTCAAAAAT9156205CACTTGTTGAGTGACTTTGCTTTAAGTATGATAGTATTTTATCGCATGTC
Brassica napus cultivar Xiang5A chromosome 1.
CP123876.1:14155097-14155116
CACACAAGAATCTAAGAAAAAATGCCAGAC14155097GCAAAGTCACTCAACAAGTGGATGGCTTCTGCAACTCTGGTGTGTGTTTT
Brassica napus genome assembly, chromosome: A02.
HG994356.1:13969121-13969140
CACACAAGAATCTAAGAAAAAATGCCAGAC13969121GCAAAGTCACTCAACAAGTGGATGGCTTCTGCAACTCTGGTGTGTGTTTT
Brassica rapa genome, scaffold: A02.
LR031573.1:13679373-13679392
CACACAAGAATCTAAGAAAAAATGCCAGAC13679373GCAAAGTCACTCAACAAGTGGATGGCTTCTGCAACTCTGGTGTGTGTTTT
Brassica rapa genome assembly, chromosome: A02.
LS974618.2:13753042-13753061
CACACAAGAATCTAAGAAAAAATGCCAGAC13753042GCAAAGTCACTCAACAAGTGGATGGCTTCTGCAACTCTGGTGTGTGTTTT
Onchidella celtica genome assembly, chromosome: 1.
OZ007567.1:67182388-67182407
CTTTATAACCAATCCAAAACATTCTTCTAA67182388GCAAAGTCACTCAACAAGTGCTTTGGCTGCAAAAATATTCAGCTCTATGT
Onchidella celtica genome assembly, chromosome: 12.
OZ007578.1:10609473-10609492
CTTTATAACCAATCCAAAACATTCTTCTAA10609473GCAAAGTCACTCAACAAGTGCTTTGACTGCAAAAATATTCAGCTCTATGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CACTTGTTGAGTGACTTTGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CACTTGTTGAGTGACTTTGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.099 | 0.090 | search_plus_done; http://172.18.8.135:50400/match?q=CACTTGTTGAGTGACTTTGC&k=0&no_gap=0&offset=0&limit=50
0.130 | 0.031 | search_minus_done; http://172.18.8.135:50400/match?q=GCAAAGTCACTCAACAAGTG&k=0&no_gap=0&offset=0&limit=45
0.135 | 0.004 | cgi_end;

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