GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-16 03:17:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Chionomys nivalis genome assembly, chromosome: 16.
OX465464.1:49410417-49410436
GGGTTGATGGGAATTGTCCCTACTGAATCT49410417CAGCCCTTTTCACTTCCATCAAAGTCTCTTTCTATGTAACCTACAACATG
Cyprinus carpio genome assembly, scaffold: 000002261.
LN591108.1:147712-147731
CAGCCAGTTGATCTCCCTTTCCTATCTACA147712CAGCCCTTTTCACTTCCATCCTGATCTAATCCATGTCAGTACTGTGGATC
Argyrosomus regius genome assembly, chromosome: 6.
OX336887.1:23283886-23283905
TGTTGATATCTTGCTTGATTCTTGCAAATT23283886CAGCCCTTTTCACTTCCATCCTGTGCAGGCACACACATTTTGCTACTTTT
Trifolium repens mRNA, clone: WCC15i10_053, unspecified EST.
FY459383.1:51-70
TTCTCATCCATTTTTCCCAACTCTCAAATT51CAGCCCTTTTCACTTCCATCTAAAATGACCCAATTCATCTTCTAAAAAAT
Trifolium repens isolate ACLI19 chromosome 03_Pall.
CP125841.1:15739918-15739937
TCTCAATCCATTTTTCCCAACTCTCAAATT15739918CAGCCCTTTTCACTTCCATCTAAAATGACCCAATTCATCTTCTAAAAAAT
Acentria ephemerella genome assembly, chromosome: 24.
OW971898.1:421995-422014
AATGTTGTTTTGTATCCATTACTGAAATCA421995CAGCCCTTTTCACTTCCATCTTTATAATTCTGTCAGAGTCAAAGTTCGTC
Watersipora subatra genome assembly, chromosome: 1.
OY755158.1:47518703-47518722
ACCATTACAGATTCACGAGCGACTCAAGTG47518703GATGGAAGTGAAAAGGGCTGAATTGACCACCGAGTTGGTTCAGGTCTTGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAGCCCTTTTCACTTCCATC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAGCCCTTTTCACTTCCATC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.203 | 0.194 | search_plus_done; http://172.18.8.135:50400/match?q=CAGCCCTTTTCACTTCCATC&k=0&no_gap=0&offset=0&limit=50
0.222 | 0.019 | search_minus_done; http://172.18.8.135:50400/match?q=GATGGAAGTGAAAAGGGCTG&k=0&no_gap=0&offset=0&limit=44
0.223 | 0.001 | cgi_end;

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