GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 13:42:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Accipiter gentilis genome assembly, chromosome: 15.
OV839376.1:12059074-12059093
GCCATAGTGCTGCTTGGTGGCCAAGGCATG12059074CAGCTACAAGCACACTTGGATTACTTAACATGACTCCCCAGGTCATAGTT
Trifolium pratense DNA, clone:RC0387f.ab1.
DE245310.1:190-209
CAATAATGGACTTCATTTTGAGAATATTTG190CAGCTACAAGCACACTTGGAAGTGCAGTGAGTATGGGAACAGCAAAGCAA
Trifolium repens isolate ACLI19 chromosome 04_Occ.
CP125842.1:17747488-17747507
CAATAATGGATTTCATTTTGAGAATATGTG17747488CAGCTACAAGCACACTTGGAAGTGCATTGAGTATGGGAACAGCAAAGCAA
Trifolium repens isolate ACLI19 chromosome 04_Pall.
CP125843.1:18643115-18643134
CAATAATGGATTTCATTTTGAGAATATGTG18643115CAGCTACAAGCACACTTGGAAGTGCATTGAGTATGGGAACAGCAAAGCAA
Trifolium dubium genome assembly, chromosome: 10.
OX638071.1:15260858-15260877
TTGTTTTGCTGTTCCCATACTTAAAGCACT15260858TCCAAGTGTGCTTGTAGCTGCTAATACTCTCAAAATAAAGTCCATTATTG
Trifolium dubium genome assembly, chromosome: 14.
OX638075.1:13565337-13565356
TTGTTTTGCTGTTCCCATACTTAAAGCACT13565337TCCAAGTGTGCTTGTAGCTGCAAATACTCTTAAAATAAAGTCCATTATTG
Trifolium fragiferum genome assembly, chromosome: 2.
OX940790.1:42479012-42479031
TTGTTTTGCTGTTCCCATACTCAATGCACT42479012TCCAAGTGTGCTTGTAGCTGCAACTATTCTCAAAATAAAGTCCATTATTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAGCTACAAGCACACTTGGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAGCTACAAGCACACTTGGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.120 | 0.111 | search_plus_done; http://172.18.8.135:50400/match?q=CAGCTACAAGCACACTTGGA&k=0&no_gap=0&offset=0&limit=50
0.136 | 0.016 | search_minus_done; http://172.18.8.135:50400/match?q=TCCAAGTGTGCTTGTAGCTG&k=0&no_gap=0&offset=0&limit=46
0.138 | 0.002 | cgi_end;

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