GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 21:37:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Arachis hypogaea DNA, clone: AHGS40P15.
DH961609.1:15-34
ACCTTCAAGGCAAC15CAGGACGGCAAACACTAACACTGTTAATATTTTCTGCAAGTAAATGTGAG
Arachis hypogaea cultivar Shitouqi chromosome B08.
CP031000.1:12292019-12292038
GATTTCAGTAGCAGGTACCTTCAAGGCAAC12292019CAGGACGGCAAACACTAACACTGTTAATATTTTCTGCAAGTAAATGTGAG
Arachis ipaensis cultivar K30076 chromosome 08.
CP049899.1:11899072-11899091
GATTTCAGTAGCAGGTACCTTCAAGGCAAC11899072CAGGACGGCAAACACTAACACTGTTAATATTTTCTGCAAGTAAATGTGAG
Pecten maximus genome assembly, chromosome: 15.
LR736852.1:7077010-7077029
CATACCTTTCTGATTTGGGAGGGTGTACTT7077010TGTTAGTGTTTGCCGTCCTGTGATAGCGGTGAAGTGATACCAAATTTATA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAGGACGGCAAACACTAACA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAGGACGGCAAACACTAACA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.114 | 0.105 | search_plus_done; http://172.18.8.135:50400/match?q=CAGGACGGCAAACACTAACA&k=0&no_gap=0&offset=0&limit=50
0.139 | 0.026 | search_minus_done; http://172.18.8.135:50400/match?q=TGTTAGTGTTTGCCGTCCTG&k=0&no_gap=0&offset=0&limit=47
0.140 | 0.001 | cgi_end;

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