GGGenome | Results

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143379.1:33026388-33026412

GCAAGTTTCCGATCTTGGAAGGGATCTTTC33026388CAGTCAATTGATTCCTAGACAAGTTCAAGGTACCCAATTGAATAAGGCTACTTAT

Malus sylvestris genome assembly, chromosome: 5.
OU696507.1:35949334-35949358

GCAAGTTTCCGATTTTGGAAGGGATATTTC35949334CAGTCAATTGATTCCTAGACAAGTTCAAGGTACCCAATAGAATGAGGCTACTTAT

Malus domestica genome assembly, chromosome: 5.
OU744546.1:35052298-35052322

GCAAGTTTCCGATTTTGGAAGGGATATTTC35052298CAGTCAATTGATTCCTAGACAAGTTCAAGGTACCCAATAGAATGAGGCTACTTAT

Malus domestica genome assembly, chromosome: 5.
OU744546.1:35098137-35098161

GCAAGTTTCCGATTTTGGAAGGGATATTTC35098137CAGTCAATTGATTCCTAGACAAGTTCAAGGTACCCAATAGAATGAGGCTACTTAT

Malus domestica genome assembly, chromosome: 5.
OU744995.1:36390857-36390881

GCAAGTTTCCGATCTTGGAAGGGATCTTTC36390857CAGTCAATTGATTCCTAGACAAGTTCAAGGTACCCAATAGAATGAGGCTACTTAT

Pyrus communis genome assembly, chromosome: 2.
OY757069.1:7059092-7059116

GCAAGTTTCCGATCTCGGAAGGGATCTTTC7059092CAGTCAATTGATTCCTAGACAAGTTCAAGGTACCCAATAGAATGAGGCTACTTAT

Malus hybrid cultivar cultivar Flame chromosome 5.
CP141914.1:10525722-10525746

ATAAGTAGCCTCATTCTATTGGGTACCTTG10525722AACTTGTCTAGGAATCAATTGACTGGAAAGATCTCTTCCAAGATCGGAAACTTGC

Malus hybrid cultivar cultivar Flame chromosome 5.
CP141914.1:10634986-10635010

ATAAGTAGCCTCATTCCATTGGGTACCTTG10634986AACTTGTCTAGGAATCAATTGACTGGAAAGATCCCTTCCAAGATCGGAAACTTGC

Malus hybrid cultivar cultivar Flame chromosome 5.
CP141931.1:11012750-11012774

ATAAGTAGCCTCATTCTATTGGGTACCTTG11012750AACTTGTCTAGGAATCAATTGACTGGAAAGATCCCTTCCAAGATCGGAAACTTGC

Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141957.1:10488826-10488850

ATAAGTAGCCTTATTCTATTGGGTACCTTG10488826AACTTGTCTAGGAATCAATTGACTGGAAAGATCCCTTCCAAGATCGGAAACTTGC

Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141957.1:10532937-10532961

ATAAGTAGCCTCATTCTATTGGGTACCTTG10532937AACTTGTCTAGGAATCAATTGACTGGAAATATCCCTTCCAAGATCGGAAACTTGC

Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141974.1:11288271-11288295

ATAAGTAGCCTCATTCTATTGGGTACCTTG11288271AACTTGTCTAGGAATCAATTGACTGGAAAGATCCCTTCCAAGATCGGAAACTTGC

Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141974.1:11349733-11349757

ATAAGTAGCCTCATTCTATTGGGTACCTTG11349733AACTTGTCTAGGAATCAATTGACTGGAAATATCCCTTCCAAGATCGGAAACTTGC

Crataegus laevigata genome assembly, chromosome: 2.
OY756939.1:11801242-11801266

ATAAGCAGCCTCATTCTATTGGGTACCTTG11801242AACTTGTCTAGGAATCAATTGACTGGAAAGATCCCTTCCAAGATCGGAAACTTGC

Pyrus communis genome assembly, chromosome: 2.
OY757069.1:8630566-8630590

ATAATTAGCCTCATTCTATTGGGTACCTTG8630566AACTTGTCTAGGAATCAATTGACTGGAAAGATCCCTTCCAAGATCGGAAACTTGC

Pyrus communis genome assembly, chromosome: 2.
OY757069.1:8647784-8647808

ATAAGTAGCCTCATTCTATTGGGTACCTTG8647784AACTTGTCTAGGAATCAATTGACTGGAAAGATCCCTTCCCAGATTGGAAACTTGC

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Debug Info:

0.009 | 0.009 | search_start;
0.105 | 0.096 | search_plus_done; http://172.18.8.135:50400/match?q=CAGTCAATTGATTCCTAGACAAGTT&k=0&no_gap=0&offset=0&limit=50
0.178 | 0.073 | search_minus_done; http://172.18.8.135:50400/match?q=AACTTGTCTAGGAATCAATTGACTG&k=0&no_gap=0&offset=0&limit=44
0.185 | 0.007 | cgi_end;

Summary:

Results:

Data Export:

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