GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 21:36:27, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Porphyra yezoensis PyACT3 mRNA for actin, complete cds.
AB126237.1:1267-1286
TCTAGACCACCCGCGTGGCGGGCTGCAAGC1267CAGTCGAGCAAGTGCTTCTGGGATGTCACCGTAGCGGACTGCGCAAGGGT
Limnephilus auricula genome assembly, chromosome: 6.
OX638394.1:11365203-11365222
TGAGGAAATATGGGAAGTGCAGGGCACGAG11365203CAGTCGAGCAAGTGCTTCTGCGACAATCCCGCATGCCTCGGATATGAAGG
Gobius niger genome assembly, chromosome: 7.
OX637601.1:22884921-22884940
TAAGGGTTACTACATTTCACATTGCCTTTG22884921CAGAAGCACTTGCTCGACTGCACATGATGCATTTTCACAGATGAGCTCAT
Porphyra yezoensis cDNA clone:PM004c05_r, 5' end.
AV431692.1:188-207
ACCCTTGCGCAGTCCGCTACGGTGACATCC188CAGAAGCACTTGCTCGACTGGCTTGCAGCCCGCCACGCGGGTGGTCTAAA
Porphyra yezoensis cDNA clone:PM013b05_r, 5' end.
AV432311.1:179-198
ACCCTTGCGCAGTCCGCTACGGTGACATCC179CAGAAGCACTTGCTCGACTGGCTTGCAGCCCGCCACGCGGGTGGTCTAGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAGTCGAGCAAGTGCTTcTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAGTCGAGCAAGTGCTTcTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.094 | 0.085 | search_plus_done; http://172.18.8.135:50400/match?q=CAGTCGAGCAAGTGCTTCTG&k=0&no_gap=0&offset=0&limit=50
0.136 | 0.042 | search_minus_done; http://172.18.8.135:50400/match?q=CAGAAGCACTTGCTCGACTG&k=0&no_gap=0&offset=0&limit=48
0.138 | 0.002 | cgi_end;

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