GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 04:33:42, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

RBAA268TV RBAA-Castor bean cDNA library from leaves,680bp Ricinus communis cDNA clone RBAA268, mRNA sequence.
EE254084.1:121-142
AAACAAACATGAAAGTTTGAGTTATGTACC121CAGTTTCACACCAAGCTGGTAATATTTCACAGCATTTATTGGCACTACTGTA
RBAA268TO RBAA-Castor bean cDNA library from leaves,680bp Ricinus communis cDNA clone RBAA268, mRNA sequence.
EE254510.1:91-112
AAACAAACATGAAAGTTTGAGTTATGTACC91CAGTTTCACACCAAGCTGGTAATATTTCACAGCATTTATTGGCACTACTGTA
RFAA144TV Castor bean cDNA library from flowers,800bp Ricinus communis cDNA clone RFAA144, mRNA sequence.
EE254685.1:71-92
AAACAAACATGAAAGTTTGAGTTATGTACC71CAGTTTCACACCAAGCTGGTAATATTTCACAGCATTTATTGGCACTACTGTA
RCRBW88TO Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRBW88, mRNA sequence.
EG666707.1:86-107
AAACAAACATGAAAGTTTGAGTTATGTACC86CAGTTTCACACCAAGCTGGTAATATTTCACAGCATTTATTGGCACTACTGTA
RCRCD47TO Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRCD47, mRNA sequence.
EG669553.1:104-125
AAACAAACATGAAAGTTTGAGTTATGTACC104CAGTTTCACACCAAGCTGGTAATATTTCACAGCATTTATTGGCACTACTGTA
RCRCI93TO Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRCI93, mRNA sequence.
EG670553.1:405-426
AAACAAACATGAAAGTTTGAGTTATGTACC405CAGTTTCACACCAAGCTGGTAATATTTCACAGCATTTATTGGCACTACTGTA
RCRDM58TO Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRDM58, mRNA sequence.
EG677461.1:86-107
AAACAAACATGAAAGTTTGAGTTATGTACC86CAGTTTCACACCAAGCTGGTAATATTTCACAGCATTTATTGGCACTACTGTA
RCRDY42TO Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRDY42, mRNA sequence.
EG679521.1:106-127
AAACAAACATGAAAGTTTGAGTTATGTACC106CAGTTTCACACCAAGCTGGTAATATTTCACAGCATTTATTGGCACTACTGTA
RCRBK55TO Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRBK55, mRNA sequence.
EG689199.1:86-107
AAACAAACATGAAAGTTTGAGTTATGTACC86CAGTTTCACACCAAGCTGGTAATATTTCACAGCATTTATTGGCACTACTGTA
RCRBP04TO Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRBP04, mRNA sequence.
EG689937.1:104-125
AAACAAACATGAAAGTTTGAGTTATGTACC104CAGTTTCACACCAAGCTGGTAATATTTCACAGCATTTATTGGCACTACTGTA
RBAA268TH RBAA-Castor bean cDNA library from leaves,680bp Ricinus communis cDNA clone RBAA268, mRNA sequence.
EE254161.1:420-441
TACAGTAGTGCCAATAAATGCTGTGAAATA420TTACCAGCTTGGTGTGAAACTGGGTACATAACTCAAACTTTCATGTTTGTTT
RFAA144TH Castor bean cDNA library from flowers,800bp Ricinus communis cDNA clone RFAA144, mRNA sequence.
EE254924.1:430-451
TACAGTAGTGCCAATAAATGCTGTGAAATA430TTACCAGCTTGGTGTGAAACTGGGTACATAACTCAAACTTTCATGTTTGTTT
RFAA320TH Castor bean cDNA library from flowers,800bp Ricinus communis cDNA clone RFAA320, mRNA sequence.
EE255062.1:504-525
TACAGTAGTGCCAATAAATGCTGTGAAATA504TTACCAGCTTGGTGTGAAACTGGGTACATAACTCAAACTTTCATGTTTGTTT
RFAAU08TH Castor bean cDNA library from flowers,800bp Ricinus communis cDNA clone RFAAU08, mRNA sequence.
EE255894.1:626-647
TACAGTAGTGCCAATAAATGCTGTGAAATA626TTACCAGCTTGGTGTGAAACTGGGTACATAACTCAAACTTTCATGTTTGTTT
RFAAY18TH Castor bean cDNA library from flowers,800bp Ricinus communis cDNA clone RFAAY18, mRNA sequence.
EE255983.1:583-604
TACAGTAGTGCCAATAAATGCTGTGAAATA583TTACCAGCTTGGTGTGAAACTGGGTACATAACTCAAACTTTCATGTTTGTTT
RFABQ89TH Castor bean cDNA library from flowers,800bp Ricinus communis cDNA clone RFABQ89, mRNA sequence.
EE260687.1:624-645
TACAGTAGTGCCAATAAATGCTGTGAAATA624TTACCAGCTTGGTGTGAAACTGGGTACATAACTCAAACTTTCATGTTTGTTT
RCRCD47TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRCD47, mRNA sequence.
EG669554.1:740-761
TACAGTAGTGCCAATAAATGCTGTGAAATA740TTACCAGCTTGGTGTGAAACTGGGTACATAACTCAAACTTTCATGTTTGTTT
RCRCI93TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRCI93, mRNA sequence.
EG670554.1:392-413
TACAGTAGTGCCAATAAATGCTGTGAAATA392TTACCAGCTTGGTGTGAAACTGGGTACATAACTCAAACTTTCATGTTTGTTT
RCRDY42TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRDY42, mRNA sequence.
EG679522.1:583-604
TACAGTAGTGCCAATAAATGCTGTGAAATA583TTACCAGCTTGGTGTGAAACTGGGTACATAACTCAAACTTTCATGTTTGTTT
RCRBK55TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRBK55, mRNA sequence.
EG689200.1:583-604
TACAGTAGTGCCAATAAATGCTGTGAAATA583TTACCAGCTTGGTGTGAAACTGGGTACATAACTCAAACTTTCATGTTTGTTT
RCRBP04TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRBP04, mRNA sequence.
EG689938.1:583-604
TACAGTAGTGCCAATAAATGCTGTGAAATA583TTACCAGCTTGGTGTGAAACTGGGTACATAACTCAAACTTTCATGTTTGTTT
LINN_XX_012_B09_LINN12.CR_B09 R. communis developing seed Ricinus communis cDNA, mRNA sequence.
GE633260.1:580-601
TACAGTAGTGCCAATAAATGCTGTGAAATA580TTACCAGCTTGGTGTGAAACTGGGTACATAACTCAAACTTTCATGTTTGTTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAGTTTCACACCAAGCTGGTAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAGTTTCACACCAAGCTGGTAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.559 | 0.550 | search_plus_done; http://172.18.8.135:50400/match?q=CAGTTTCACACCAAGCTGGTAA&k=0&no_gap=0&offset=0&limit=50
1.347 | 0.789 | search_minus_done; http://172.18.8.135:50400/match?q=TTACCAGCTTGGTGTGAAACTG&k=0&no_gap=0&offset=0&limit=40
1.355 | 0.008 | cgi_end;

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