GGGenome | Results

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Malus hybrid cultivar cultivar Royalty chromosome 7.
CP141959.1:33521140-33521162

AGGCCGTTGCCGCTGATGATATAAATATTG33521140CATCAGCCTACGAGCACATACACCACCATCATAGGGACGCTTAATGGAAGATA

Malus hybrid cultivar cultivar Royalty chromosome 2.
CP141971.1:7353945-7353967

AGGCCGTTGCCGCTGATGATATAAATATTG7353945CATCAGCCTACGAGCACATACACCACCATCATAGGGACGCTTAATGGAAGATA

Malus hybrid cultivar cultivar Royalty chromosome 2.
CP141971.1:7460679-7460701

AGGCCGTTGCCGCTGATGATGTAAATATTG7460679CATCAGCCTACGAGCACATACACCACCATCATAGGGACGCTTAATGGAAGATA

Malus hybrid cultivar cultivar Royalty chromosome 2.
CP141971.1:7670074-7670096

AGGCCGTAGCCGCAGATGATATAAATATTG7670074CATCAGCCTACGAGCACATACACCACCATCATAGGGACGCTTAATGGAAGATA

Malus hybrid cultivar cultivar Royalty chromosome 7.
CP141976.1:32789781-32789803

AGGCCGTTGCCGCTGATGATATAAATATTG32789781CATCAGCCTACGAGCACATACACCACCATCATAGGGACGCTTAATGGAAGATA

Malus hybrid cultivar cultivar SH6 chromosome 2.
CP143359.1:7382193-7382215

AGGCCGTAGCCGCAGATGATATAAATATTG7382193CATCAGCCTACGAGCACATACACCACCATCATAGGGACGCTTAATGGAAGATA

Malus hybrid cultivar cultivar SH6 chromosome 7.
CP143364.1:32183749-32183771

AGGCCGTTGCCGCTGATGATATAAATATTG32183749CATCAGCCTACGAGCACATACACCACCATCATAGGGACGCTTAATGGAAGATA

Malus hybrid cultivar cultivar SH6 chromosome 7.
CP143381.1:32120945-32120967

AGGCCGTTGTCGCTGATGATATAAATATTG32120945CATCAGCCTACGAGCACATACACCACCATCATAGGGTCGCTTAATGGAAGATA

Malus sylvestris genome assembly, chromosome: 7.
OU696509.1:32566561-32566583

AGGCCGTTGCCGCTGATGATATAAATATTG32566561CATCAGCCTACGAGCACATACACCACCATCATAGGGACGCTTAATGGAAGATA

Malus domestica genome assembly, chromosome: 2.
OU696678.1:7437512-7437534

AGGCCGTAGCCGCAGATGATATAAATATTG7437512CATCAGCCTACGAGCACATACACCACCATCATAGGGACGCTTAATGGAAGATA

Malus domestica genome assembly, chromosome: 7.
OU696683.1:32118849-32118871

AGGCCGTTGCCGCTGATGATATAAATATTG32118849CATCAGCCTACGAGCACATACACCACCATCATAGGGACGCTTAATGGAAGATA

Malus domestica genome assembly, chromosome: 2.
OU744543.1:7904143-7904165

AGGCCGTAGCCGCAGATGATATAAATATTG7904143CATCAGCCTACGAGCACATACACCACCATCATAGGGACGCTTAATGGAAGATA

Malus domestica genome assembly, chromosome: 7.
OU744548.1:33145636-33145658

AGGCCGTTGCCGCTGATGATATAAATATTG33145636CATCAGCCTACGAGCACATACACCACCATCATAGGGACGCTTAATGGAAGATA

Malus domestica genome assembly, chromosome: 2.
OU744954.1:7419983-7420005

AGGCCGTAGCCGCAGATGATATAAATATTG7419983CATCAGCCTACGAGCACATACACCACCATCATAGGGACGCTTAATGGAAGATA

Malus domestica genome assembly, chromosome: 7.
OU744959.1:32737353-32737375

AGGCCGTTGCCGCTGATGATATAAATATTG32737353CATCAGCCTACGAGCACATACACCACCATCATAGGGACGCTTAATGGAAGATA

Malus domestica genome assembly, chromosome: 2.
OU744992.1:7437453-7437475

AGGCCGTAGCCGCAGATGATATAAATATTG7437453CATCAGCCTACGAGCACATACACCACCATCATAGGGACGCTTAATGGAAGATA

Malus domestica genome assembly, chromosome: 7.
OU744997.1:32382951-32382973

AGGCCGTTGCCGCTGATGATATAAATATTG32382951CATCAGCCTACGAGCACATACACCACCATCATAGGGACGCTTAATGGAAGATA

Crataegus laevigata genome assembly, chromosome: 10.
OY756947.1:35144519-35144541

AGGCCGTTGCCGCTGATGATATAAATATTG35144519CATCAGCCTACGAGCACATACACCACCATCATAGGGACGCTTAATGGAAGATA

Pyrus communis genome assembly, chromosome: 5.
OY757072.1:27205620-27205642

AGGCCGTTGCCGCTGATGATATAAATATTG27205620CATCAGCCTACGAGCACATACACCACTATCATAGGGACGCTTAATGGAAGATA

Dryas octopetala genome assembly, chromosome: 3.
OY992834.1:2379932-2379954

AGGTCGTTGCCGCTGATGATATAGATATTG2379932CATCAGCCTACGAGCACATACACCACCATCATAGGGACGCTTATTAGAAGGTG

Pyrus pyrifolia cultivar Housui mRNA, clone: TsuENH049_00296m, 5' end sequence.
AB450724.1:538-560

ATCTTCCATTAAGCCGTCCCTATGATAGTG538GTGTATGTGCTCGTAGGCTGATGCAATATTTATATCATCAGCGGCAACGG

Malus hybrid cultivar cultivar Flame chromosome 2.
CP141911.1:28576326-28576348

TATCTTCCATTAAGCGTCCCTATGATAGTG28576326GTGTATGTGCTCGTAGGCTGATGCAATATTTACAGCATCAGCAGCAACGGCCT

Malus hybrid cultivar cultivar Flame chromosome 7.
CP141916.1:3530103-3530125

TATCTTCCATTAAGCGTCCCTATGATGGTG3530103GTGTATGTGCTCGTAGGCTGATGCAATATTTATATCATCAGCGGCAACGGCCT

Malus hybrid cultivar cultivar Flame chromosome 7.
CP141933.1:3076388-3076410

TATCTTCCATTAAGCGTCCCTATGATGGTG3076388GTGTATGTGCTCGTAGGCTGATGCAATATTTATATCATCAGCGGCAACGGCCT

Malus hybrid cultivar cultivar Royalty chromosome 12.
CP141964.1:824004-824026

TATCTTCCATTAAGCGTCCCTATGATGGTG824004GTGTATGTGCTCGTAGGCTGATGCAATATTTAGATCATCAGCGGCAACGGCCT

Potentilla anserina genome assembly, chromosome: 7.
OW176987.1:22290861-22290883

CATATTCCATTAAGCGTCCATATGATGGTG22290861GTGTATGTGCTCGTAGGCTGATGCAGTATCTATATCATCAGCGGGAACGACCA

Malus x robusta genome assembly, chromosome: 10.
OY720334.1:3294686-3294708

TATCTTCCATTAAGCGTCCCTATGATGGTG3294686GTGTATGTGCTCGTAGGCTGATGCAATATTTATATCATCAGCGGCAACGGCCT

Crataegus laevigata genome assembly, chromosome: 5.
OY756942.1:33446292-33446314

TATCTTCCATTAAGCGTCCCTATGATGGTG33446292GTGTATGTGCTCGTAGGCTGATGCAATATTTAGATCATCAGCGGCAAAGGCCT

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Debug Info:

0.009 | 0.009 | search_start;
0.235 | 0.226 | search_plus_done; http://172.18.8.135:50400/match?q=CATCAGCCTACGAGCACATACAC&k=0&no_gap=0&offset=0&limit=50
0.309 | 0.073 | search_minus_done; http://172.18.8.135:50400/match?q=GTGTATGTGCTCGTAGGCTGATG&k=0&no_gap=0&offset=0&limit=30
0.314 | 0.006 | cgi_end;

Summary:

Results:

Data Export:

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