GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-01 02:25:17, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Fissipunctia ypsillon genome assembly, chromosome: 7.
OX387650.1:25326400-25326419
AATAAAAGTAGGCTAAGGTACTCTTTATAA25326400CATCAGCTAGTGAAAGCCCCGTCAAAATCGGTCCAGCCGTTTTTCGGAGA
Diaphora mendica genome assembly, chromosome: 12.
OX421322.1:5867437-5867456
TAAAAAAGTAGCTTAAGGTTCTCCTTATTG5867437CATCAGCTAGTGAAAGCCCCGTCAAAATCGGTCCAGCTGTTCCAGAGATT
Phengaris arion genome assembly, chromosome: 11.
OY751442.1:20703813-20703832
GATAAAAGTAGCCCCTGTTTCTCCTTATAA20703813CATCAGCTAGTGAAAGCCCCGTGGAAATCGGTCCAGGCAAATCAGAGATT
Vigna angularis mRNA, clone: VES10D09.
HX945937.1:580-599
ATGAGGCGAAGGCCGCAAGCATGGTTGGAG580GGGGCTTTCACTAGCTGATGGAGTTTTTCATGTTTCAGTTTTGTCCCCTG
Vigna angularis mRNA, clone: VES17A06.
HX948501.1:650-669
ATGAGGCGAAGGCCGCAAGCATGGTTGGAG650GGGGCTTTCACTAGCTGATGGAGTTTTTCATGTTTCAGTTTTGTCCCCTG
Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari.
AP015044.1:17876535-17876554
ATGAGGCGAAGGCCGCAAGCATGGTTGGAG17876535GGGGCTTTCACTAGCTGATGGAGTTTTTCATGTTTCAGTTTTGTCCCCTG
Pheosia tremula genome assembly, chromosome: 2.
HG995398.1:6195571-6195590
AATCTCTGAAATGGCTGGACCGATTTTGAC6195571GGGGCTTTCACTAGCTGATGTAACAAGGCGTATCCTAGGCTACTTTTATT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CATCAGCTAGTGAAAGCCCC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CATCAGCTAGTGAAAGCCCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.110 | 0.101 | search_plus_done; http://172.18.8.135:50400/match?q=CATCAGCTAGTGAAAGCCCC&k=0&no_gap=0&offset=0&limit=50
0.283 | 0.173 | search_minus_done; http://172.18.8.135:50400/match?q=GGGGCTTTCACTAGCTGATG&k=0&no_gap=0&offset=0&limit=47
0.286 | 0.003 | cgi_end;

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