GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2026-01-09 02:43:22, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Mus musculus genome assembly, chromosome: 19.
OW971561.1:2971624-2971641
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC2971624CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus musculus genome assembly, chromosome: 19.
OW971592.1:2756287-2756304
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC2756287CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus musculus genome assembly, chromosome: 19.
OW971613.1:2901747-2901764
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC2901747CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus musculus domesticus genome assembly, chromosome: 19.
OW971623.1:2776492-2776509
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC2776492CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus musculus genome assembly, chromosome: 19.
OW971655.1:3503325-3503342
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC3503325CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus musculus molossinus genome assembly, chromosome: 19.
OW971676.1:3107624-3107641
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC3107624CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus spretus genome assembly, chromosome: 19.
OW971697.1:2862061-2862078
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC2862061CATGCCTCGCTGGAGAAGCAGAGTGAGACAGACGCTACATTTCGAGTT
Mus musculus genome assembly, chromosome: 19.
OW971709.1:3138615-3138632
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC3138615CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus musculus genome assembly, chromosome: 19.
OW971739.1:2733315-2733332
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC2733315CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus musculus genome assembly, chromosome: 19.
OW971760.1:3128610-3128627
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC3128610CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus musculus musculus genome assembly, chromosome: 19.
OW971781.1:2872892-2872909
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC2872892CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus musculus genome assembly, chromosome: 19.
OW971802.1:2663112-2663129
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC2663112CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus musculus genome assembly, chromosome: 19.
OW971823.1:3132780-3132797
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC3132780CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus musculus castaneus genome assembly, chromosome: 19.
OW971835.1:2889770-2889787
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC2889770CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus musculus genome assembly, chromosome: 19.
OW971854.1:2753513-2753530
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC2753513CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus musculus genome assembly, chromosome: 19.
OX389813.1:7749014-7749031
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC7749014CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus musculus genome assembly, chromosome: 19.
OX390162.1:4040204-4040221
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC4040204CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus musculus genome assembly, chromosome: 19.
OX439033.1:3995143-3995160
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC3995143CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus musculus strain C57BL_6J genome assembly, chromosome: 19.
OZ077260.1:11941707-11941724
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC11941707CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus musculus castaneus strain CAST_EiJ genome assembly, chromosome: 19.
OZ077279.1:16353959-16353976
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC16353959CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Martes foina genome assembly, chromosome: 6.
OZ199609.1:129596973-129596990
AAATATCTTGTACGGCATATTAACTGGCAC129596973CATGCCTCGCTGGAGAAGGAAGATGGTGCTGCTACATATTTGCTTAGT
GH_HYPT_01-01-27R_A11_InvR_29Apr04_095_R Stem - 3 weeks after planting Gossypium hirsutum cDNA, mRNA sequence.
DW226878.1:396-413
TCGACTTCTTGATGGTCAGAACAAGATTGG396CATGCCTCGCTGGAGAAGTGTAAAATTGATGTCTCTCCATTATTCTGA
Gossypium hirsutum cultivar TM1 chromosome A11.
CP023743.1:5536637-5536654
TCGACTCCTTGATGGTCAGAACAAGATTGG5536637CATGCCTCGCTGGAGAAGTGTAAAATTGATGTCTCTCCATTATTCTGA
Gossypium raimondii isolate D5-4 chromosome D5_11.
CP032563.1:56849691-56849708
TCGACTCCTTGATTATCAGAACAAGATCGG56849691CATGCCTCGCTGGAGAAGTGTAAAACTGATGTCTCTCCATTATTCTGA
Gossypium rotundifolium isolate GPK201 chromosome 11.
CP106732.1:172728740-172728757
TCGACTCCTTGATGGTCAGAACAAGGTCTG172728740CATGCCTCGCTGGAGAAGTGTAAAATTGATGTCTCTCCATTATTCCGA
Neofusicoccum laricinum strain HLJ-QQHE-4 chromosome 13.
CP123726.1:522405-522422
GAGTGCGCACGCCCTGCCACCATGCGGACA522405CATGCCTCGCTGGAGAAGGACGAGGAGATCAACCGCGCCGCCTGGGTC
UNVERIFIED_CONTAM: Avena longiglumis isolate 447 chromosome 1.
CP125973.1:146398298-146398315
CTGGCGTGGCGGCATGGGATTTGTGGGTGG146398298CATGCCTCGCTGGAGAAGTTCGCCCCTTGAGTCGCCGCCCTCCTTGAC
Aegilops speltoides subsp. speltoides genome assembly, chromosome: 2B.
OX082598.1:546914348-546914365
CCGGCATGTCGCGGAAGCGACCTCCCTTGC546914348CATGCCTCGCTGGAGAAGGAAGGATTTCGCTTGTTAATATACGAGATC
Thuidium tamariscinum genome assembly, chromosome: 1.
OX344749.2:36335240-36335257
AACAAATGGACAGAAGGGAAGGATTGCTGC36335240CATGCCTCGCTGGAGAAGTTGGATCGATTGATTGATCAGACTTTGTGT
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737380.1:297544096-297544113
AACTATACCATTTTTGGTTTGCAATCTAGA297544096CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737387.1:297119741-297119758
AACTATACCATTTTTGGTTTGCAATCTAGA297119741CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737412.1:291295794-291295811
AACTATACCATTTCTGGTTTGCAATCTAGA291295794CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737419.1:279883274-279883291
AACTATACCATTTCTGGTTTGCAATCTAGA279883274CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737430.1:306942102-306942119
AACTATACCATTTCTGGTTTGCAATCTAGA306942102CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737437.1:285815259-285815276
AACTATACCATTTCTGGTTTGCAATCTAGA285815259CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737521.1:302003087-302003104
AACTATACCATTTCTAGTTTGCAATCTAGA302003087CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737528.1:278606646-278606663
AACTATACCATTTCTAGTTTGCAATCTAGA278606646CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_3.
OY737535.1:290289984-290290001
AACTATACCATTTCTGGTTTGCAATCTAGA290289984CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 6H_3.
OY737537.1:283738133-283738150
AATGATACCATTTCCAGTTTGCAATCCAGA283738133CATGCCTCGCTGGAGAAGAACATTGAATCTACCGGTGCTCAAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_4.
OY737542.1:279320868-279320885
AACTATACCATTTCTAGTTTGCAATCTAGA279320868CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737621.1:300343642-300343659
AACTATACCATTTCTGGTTTGCAATCTAGA300343642CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_3.
OY737628.1:230050843-230050860
AACTATACCATTTTTGGTTTGCAATCTAGA230050843CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY741223.1:297544096-297544113
AACTATACCATTTTTGGTTTGCAATCTAGA297544096CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY741230.1:297119741-297119758
AACTATACCATTTTTGGTTTGCAATCTAGA297119741CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY741238.1:302003087-302003104
AACTATACCATTTCTAGTTTGCAATCTAGA302003087CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY741245.1:278606646-278606663
AACTATACCATTTCTAGTTTGCAATCTAGA278606646CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_3.
OY741252.1:290289984-290290001
AACTATACCATTTCTGGTTTGCAATCTAGA290289984CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 6H_3.
OY741254.1:283738133-283738150
AATGATACCATTTCCAGTTTGCAATCCAGA283738133CATGCCTCGCTGGAGAAGAACATTGAATCTACCGGTGCTCAAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_4.
OY741259.1:279320868-279320885
AACTATACCATTTCTAGTTTGCAATCTAGA279320868CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY741357.1:306942102-306942119
AACTATACCATTTCTGGTTTGCAATCTAGA306942102CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY741364.1:285815259-285815276
AACTATACCATTTCTGGTTTGCAATCTAGA285815259CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY741379.1:300343642-300343659
AACTATACCATTTCTGGTTTGCAATCTAGA300343642CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_3.
OY741386.1:230050843-230050860
AACTATACCATTTTTGGTTTGCAATCTAGA230050843CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY741401.1:291295794-291295811
AACTATACCATTTCTGGTTTGCAATCTAGA291295794CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY741408.1:279883274-279883291
AACTATACCATTTCTGGTTTGCAATCTAGA279883274CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Paenibacillus sp. RUD330 chromosome, complete genome.
CP022655.2:406153-406170
GAGCAGTATGTGTTCACGAACGGGCAAGGC406153CATGCCTCGCTGGAGAAGGAAGTGAAGAAGGCTTTCCGCAAGCTGCAC
Pseudorhiza haeckeli genome assembly, chromosome: 1.
OZ032114.1:838348-838365
GCAGCTGAAGTACACGGGCATGTCCTGCGA838348CATGCCTCGCTGGAGAAGGATATCCTGATGGGGGCGATTCCTGGATCG
Pseudorhiza haeckeli genome assembly, chromosome: 3.
OZ032116.1:11544673-11544690
CAGCTGAAGTACACGGGGCAGGTCCTGCGA11544673CATGCCTCGCTGGAGAAGGACATCCAGATGGGGACGATTCCTGGATCG
Opilo mollis genome assembly, chromosome: 1.
OZ201987.1:134525779-134525796
CTGCAGGTCGGAATTCAGAATGCCGTTACT134525779CATGCCTCGCTGGAGAAGGCGTATTCAGTGCTGTTCACAATAAATAAA
Bufo bufo genome assembly, chromosome: 6.
LR991672.1:288431639-288431656
TATTATCACTGGCTTCATTGGTGCATTGTG288431639CATGCCTCGCTGGAGAAGAACCCTGGACTATTCTCACAGCAAGGCCTC
Triturus cristatus genome assembly, chromosome: 6.
OZ123747.1:1867394132-1867394149
CCACACTTTCAAGTCCAAGTTTCAGGAATT1867394132CATGCCTCGCTGGAGAAGATGAGATCAGCGCAGGAATAGACCCGCTAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CATGCCTCGCTGGAGAAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CATGCCTCGCTGGAGAAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.421 | 0.412 | search_plus_done; http://172.18.8.135:50800/match?q=CATGCCTCGCTGGAGAAG&k=0&no_gap=0&offset=0&limit=50
0.595 | 0.174 | search_minus_done; http://172.18.8.135:50800/match?q=CTTCTCCAGCGAGGCATG&k=0&no_gap=0&offset=0&limit=0
0.595 | 0.000 | cgi_end;

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