GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 07:27:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Populus nigra genome assembly, chromosome: 7.
OX637678.1:3098684-3098705
GTCAGATTATGTCACATGTCTAGAACTTCA3098684CATGCTTCATTTGATGCAATTGCAGTTGGAGATATACAGCCGATGTTACAAC
Chymomyza fuscimana genome assembly, chromosome: 2.
OX465089.1:552507-552528
TGGCTATAGGCGAGAGTATAGAAAGGTTGT552507CATGCTTCATTTGATGCAATTGAAAGCCCCTAAAACCTCCATCCCATCCCCC
Fagus sylvatica genome assembly, chromosome: 8.
OU015768.1:32843090-32843111
GTTACTTGTCAACTCAACTTGCATCATAAG32843090CAATTGCATCAAATGAAGCATGATGCTCACCTCATACTGTGCTTGCCCACCG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CATGCTTCATTTGATGCAATTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CATGCTTCATTTGATGCAATTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.091 | 0.082 | search_plus_done; http://172.18.8.135:50400/match?q=CATGCTTCATTTGATGCAATTG&k=0&no_gap=0&offset=0&limit=50
0.104 | 0.013 | search_minus_done; http://172.18.8.135:50400/match?q=CAATTGCATCAAATGAAGCATG&k=0&no_gap=0&offset=0&limit=48
0.104 | 0.001 | cgi_end;

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