GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-15 19:44:23, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

RS2D553TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
EX898332.1:79-100
AAAGTGGACAGTACATGTTCGTGAACTGTA79GAGCCGTATCTCCCTTTGAATGGCATCCTTTCTCCATCACATCCGCTCCAGG
RR3GV51TF RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence.
FD981028.1:124-145
AAAGTGGACAGTACATGTTCGTGAACTGTA124GAGCCGTATCTCCCTTTGAATGGCATCCTTTCTCCATCACATCCGCTCCAGG
c10_03ni_1r.s 03ni Brassica nigra cDNA clone c10_03ni_1r 5, mRNA sequence.
GT075652.1:341-362
AAAGTGGACAGTACATGTTCGTGAACTGTA341GAGCCGTATCTCCCTTTGAATGGCATCCTTTCTCCATCACATCCTCTCCGGG
Rattus norvegicus clone CH230-85I5, WORKING DRAFT SEQUENCE, 2 unordered pieces.
AC131541.4:123929-123950
TGCTGCTTATGGAAACTAACATGACCCAGA123929GAGCCGTATCTCCCTTTGAATGCCTGTGTAAGGTCAATGGAGTGGCAAAATA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CATTCAAAGGGAGATACGGCTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CATTCAAAGGGAGATACGGCTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.149 | 0.140 | search_plus_done; http://172.18.8.135:50400/match?q=CATTCAAAGGGAGATACGGCTC&k=0&no_gap=0&offset=0&limit=50
0.401 | 0.251 | search_minus_done; http://172.18.8.135:50400/match?q=GAGCCGTATCTCCCTTTGAATG&k=0&no_gap=0&offset=0&limit=50
0.404 | 0.003 | cgi_end;

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