GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 02:37:11, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Valencia hispanica genome assembly, chromosome: 13.
OY747712.1:15653954-15653973
GAGACCAAAACAGAACATTTTGGCCAAAGT15653954CCAAAAGGACAAATCAGAGGAAAACTAATGCTGCACATCACCCTGGAATA
Sequence 17 from patent US 10669593.
MV319385.1:480858-480877
CAATATAAGCTCAACCAGCAACGCTTGACC480858CCAAAAGGACAAATCAGAGGGGTGCTATCGAGTTGGCTCCGAGATTTACT
Sequence 17 from patent US 11560601.
OS201569.1:480858-480877
CAATATAAGCTCAACCAGCAACGCTTGACC480858CCAAAAGGACAAATCAGAGGGGTGCTATCGAGTTGGCTCCGAGATTTACT
Elaeis guineensis microsatellite DNA, clone mEgCIR0046.
AJ271635.1:314-333
CAATATAAGCTCAACCAGCAACGCTTGACC314CCAAAAGGACAAATCAGAGGGGTGCTATCGAGTTGGCTCCGAGATTTACT
Bembecia ichneumoniformis genome assembly, chromosome: 4.
OU342523.1:6414162-6414181
CTGCTGGACAAAGGCCTCCCCTCTAATTCT6414162CCAAAAGGACAAATCAGAGGCAGCCTGGATCCATCGTCGACCTGCGGCCC
Sylvilagus floridanus genome assembly, chromosome: 23.
OX463245.1:14472520-14472539
AGAGCCCAGGGCTGGCCTTTGAGTAATTCA14472520CCTCTGATTTGTCCTTTTGGCCTCCCAGCCCTCTGGGGAGTAGCAAGAAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCAAAAGGACAAATCAGAGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCAAAAGGACAAATCAGAGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.234 | 0.226 | search_plus_done; http://172.18.8.135:50400/match?q=CCAAAAGGACAAATCAGAGG&k=0&no_gap=0&offset=0&limit=50
0.256 | 0.021 | search_minus_done; http://172.18.8.135:50400/match?q=CCTCTGATTTGTCCTTTTGG&k=0&no_gap=0&offset=0&limit=45
0.256 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).