GGGenome | Results

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2025-04-10 22:30:26, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome X.
CP130739.1:150707507-150707526

AACATTCCTCCGTTAAACTCAGTAGTCAAG150707507CCAATTCACTTGTTGCCACCACCAATTCTAGTGCCCCCTTCCCAATTTAC

Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome Y.
CP130887.1:156209279-156209298

AACATTCCTCCGTTAAACTCAGTAGTCAAG156209279CCAATTCACTTGTTGCCACCACCAATTCTAGTGCCCCCTTCCCAATTTAC

Marthasterias glacialis genome assembly, chromosome: 14.
OU452232.1:13365847-13365866

ACTACCAAAATGACGCAAGATTTATGGTGT13365847GGTGGCAACAAGTGAATTGGGTCAATATTGGTCAAGTCTGTGGGAATTTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.008 | 0.008 | search_start;
0.107 | 0.099 | search_plus_done; http://172.18.8.135:50400/match?q=CCAATTCACTTGTTGCCACC&k=0&no_gap=0&offset=0&limit=50
0.149 | 0.042 | search_minus_done; http://172.18.8.135:50400/match?q=GGTGGCAACAAGTGAATTGG&k=0&no_gap=0&offset=0&limit=48
0.150 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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