GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-18 07:59:19, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Plecotus auritus genome assembly, chromosome: 6.
OY734027.1:157376330-157376349
CCACCGGATCTCCTGGGACTGATGCTGTTT157376330CCACTCTGCCTCTTCTTTGGCTCATTACAGCCCCTGGGTAGGGTGAGGAC
Apoda limacodes genome assembly, chromosome: 8.
OX291548.1:20671696-20671715
TATCATAGTGACTCATTTTGAGACTACTAT20671696CCACTCTGCCTCTTCTTTGGAAAAAACTTTATATTTAATGTTTTTTAAAA
Chionographis japonica genome assembly, chromosome: 11.
OX393559.1:5104412-5104431
ACAACCGGGGCCCACCGGACCCGACCCAAG5104412CCAAAGAAGAGGCAGAGTGGGCCCATCCTCAAGTGGGGCCCACCTAGCCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCACTCTGCCTCTTCTTTGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCACTCTGCCTCTTCTTTGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.092 | 0.083 | search_plus_done; http://172.18.8.135:50400/match?q=CCACTCTGCCTCTTCTTTGG&k=0&no_gap=0&offset=0&limit=50
0.106 | 0.014 | search_minus_done; http://172.18.8.135:50400/match?q=CCAAAGAAGAGGCAGAGTGG&k=0&no_gap=0&offset=0&limit=48
0.107 | 0.001 | cgi_end;

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