GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-17 16:49:17, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

KR 1020150047857-A/1: Primer Set Useful for Selecting Pathogen Resistance Pepper.
DI494683.1:1202-1225
AGGTTGCTGGTTATGGGATAGCTTGAAATG1202CCATATCATGAATTCTTGTCCTTCATTGTTATCATAATAATCTCTACTATTGTT
TSA: Capsicum annuum MGMT_Contig21263, mRNA sequence.
JW071507.1:444-467
AGGTTGCTGGTTATGGGATAGCTTGAAATG444CCATATCATGAATTCTTGTCCTTCATTGTTATCATAATAATCTCTACTATTGTT
Capsicum annuum Takanotsume DNA, chromosome 2, sequence.
AP026697.1:65142001-65142024
AGGTTGCTGGTTATGGGATAGCTTGAAATG65142001CCATATCATGAATTCTTGTCCTTCATTGTTATCATAATAATCTCTACTATTGTT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 2.
CP124730.1:65371022-65371045
AGGTTGCTGGTTATGGGATAGCTTGAAATG65371022CCATATCATGAATTCTTGTCCTTCATTGTTATCATAATAATCTCTACTATTGTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCATATCATGAATTCTTGTCCTTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCATATCATGAATTCTTGTCCTTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.120 | 0.111 | search_plus_done; http://172.18.8.135:50400/match?q=CCATATCATGAATTCTTGTCCTTC&k=0&no_gap=0&offset=0&limit=50
0.135 | 0.015 | search_minus_done; http://172.18.8.135:50400/match?q=GAAGGACAAGAATTCATGATATGG&k=0&no_gap=0&offset=0&limit=46
0.135 | 0.000 | cgi_end;

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