GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 14:10:27, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Brassica napus genome assembly, chromosome: A01.
HG994355.1:21923586-21923612
ATATATTATGATCTAAGAATACACATTAAA21923586CCATATGACTAACTTGACACTTTTGAAAGTTAAATATATATATATATATATATATAT
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB048K11, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces.
AC189374.2:55054-55080
ATATATATATATATATATATATATTTAACT55054TTCAAAAGTGTCAAGTTAGTCATATGGTTTAATGTGTATTCTTAGATCATAATATAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCATATGACTAACTTGACACTTTTGAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCATATGACTAACTTGACACTTTTGAA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.109 | 0.100 | search_plus_done; http://172.18.8.135:50400/match?q=CCATATGACTAACTTGACACTTTTGAA&k=0&no_gap=0&offset=0&limit=50
0.134 | 0.025 | search_minus_done; http://172.18.8.135:50400/match?q=TTCAAAAGTGTCAAGTTAGTCATATGG&k=0&no_gap=0&offset=0&limit=49
0.135 | 0.001 | cgi_end;

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