GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-16 03:47:29, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Trifolium repens mRNA, clone: WCC04p04_064, unspecified EST.
FY455692.1:296-315
ATATCCTCGACTCCACCGCCGTCTTCTCCG296CCATCAATAACTGCTCCGGTGTCTTTCATGTCGCTTCTCCATGTACCCTC
Trifolium repens isolate ACLI19 chromosome 02_Occ.
CP125838.1:9983307-9983326
GAGGGTACATGGAGAAGCGACATGAAAGAC9983307ACCGGAGCAGTTATTGATGGCGGAAGAGACGGCGGTGGAGTCGAGGATGT
Trifolium repens isolate ACLI19 chromosome 02_Pall.
CP125839.1:10105028-10105047
GAGGGTACATGGAGAAGCGACATGAAAGAC10105028ACCGGAGCAGTTATTGATGGCGGAGAAGACGGCGGTGGAGTCGAGGATAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCATCAATAACTGCTCCGGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCATCAATAACTGCTCCGGT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.164 | 0.156 | search_plus_done; http://172.18.8.135:50400/match?q=CCATCAATAACTGCTCCGGT&k=0&no_gap=0&offset=0&limit=50
0.180 | 0.016 | search_minus_done; http://172.18.8.135:50400/match?q=ACCGGAGCAGTTATTGATGG&k=0&no_gap=0&offset=0&limit=49
0.181 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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