GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-14 03:46:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Meconema thalassinum genome assembly, chromosome: 1_1.
OX336388.2:736381089-736381108
TTGATAGACTGTTTCATTGGAGAGGATTCT736381089CCCGACTCCTTTAACCTGGTACTTTTTATTTATTCTGGTTCTGATAATTC
TSA: Pyrus x bretschneideri Unigene58093_XinShao mRNA sequence.
JR646891.1:79-98
CCTGCCTGTAAGTAAGGCTTGGCCCATAAC79ACCAGGTTAAAGGAGTCGGGGGTTCCAGAGTGACTCAATGGTTCTCTCCC
Pyrus communis genome assembly, chromosome: 3.
OY757070.1:18704130-18704149
AAAATACAGATATTCGGTTTTACCCATAAC18704130ACCAGGTTAAAGGAGTCGGGGGTTCCAGAGTGACTCAATGGTTCTCTCCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCCGACTCCTTTAACCTGGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCGACTCCTTTAACCTGGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.107 | 0.098 | search_plus_done; http://172.18.8.135:50400/match?q=CCCGACTCCTTTAACCTGGT&k=0&no_gap=0&offset=0&limit=50
0.132 | 0.025 | search_minus_done; http://172.18.8.135:50400/match?q=ACCAGGTTAAAGGAGTCGGG&k=0&no_gap=0&offset=0&limit=49
0.134 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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